Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.48■□□□□ 0.55
ARID3AQ99856 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ARID3AQ99856 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ARID3AQ99856 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ARID3AQ99856 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ARID3AQ99856 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ARID3AQ99856 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.48■□□□□ 0.55
ARID3AQ99856 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ARID3AQ99856 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ARID3AQ99856 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ARID3AQ99856 RPS2P1-201ENST00000434010 821 ntBASIC18.48■□□□□ 0.55
ARID3AQ99856 HNRNPDP1-201ENST00000439535 754 ntBASIC18.48■□□□□ 0.55
ARID3AQ99856 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.48■□□□□ 0.55
ARID3AQ99856 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ARID3AQ99856 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.48■□□□□ 0.55
ARID3AQ99856 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.48■□□□□ 0.55
ARID3AQ99856 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ARID3AQ99856 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ARID3AQ99856 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ARID3AQ99856 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ARID3AQ99856 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ARID3AQ99856 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ARID3AQ99856 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ARID3AQ99856 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ARID3AQ99856 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ARID3AQ99856 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ARID3AQ99856 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.48■□□□□ 0.55
ARID3AQ99856 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.48■□□□□ 0.55
ARID3AQ99856 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ARID3AQ99856 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
ARID3AQ99856 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARID3AQ99856 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARID3AQ99856 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARID3AQ99856 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARID3AQ99856 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARID3AQ99856 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.47■□□□□ 0.55
ARID3AQ99856 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.47■□□□□ 0.55
ARID3AQ99856 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARID3AQ99856 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.47■□□□□ 0.55
ARID3AQ99856 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARID3AQ99856 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.47■□□□□ 0.55
ARID3AQ99856 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARID3AQ99856 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.47■□□□□ 0.55
ARID3AQ99856 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.47■□□□□ 0.55
ARID3AQ99856 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
ARID3AQ99856 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
ARID3AQ99856 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARID3AQ99856 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.47■□□□□ 0.55
ARID3AQ99856 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ARID3AQ99856 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.47■□□□□ 0.55
ARID3AQ99856 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.47■□□□□ 0.55
ARID3AQ99856 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.47■□□□□ 0.55
ARID3AQ99856 FAAHP1-202ENST00000446499 1238 ntBASIC18.47■□□□□ 0.55
ARID3AQ99856 FAM197Y8-203ENST00000450145 560 ntBASIC18.47■□□□□ 0.55
ARID3AQ99856 RNPS1P1-201ENST00000507437 918 ntBASIC18.47■□□□□ 0.55
ARID3AQ99856 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.47■□□□□ 0.55
ARID3AQ99856 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
ARID3AQ99856 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.47■□□□□ 0.55
ARID3AQ99856 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.47■□□□□ 0.55
ARID3AQ99856 AL353135.1-201ENST00000606729 504 ntBASIC18.47■□□□□ 0.55
ARID3AQ99856 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.47■□□□□ 0.55
ARID3AQ99856 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARID3AQ99856 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ARID3AQ99856 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARID3AQ99856 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.47■□□□□ 0.55
ARID3AQ99856 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC18.47■□□□□ 0.55
ARID3AQ99856 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ARID3AQ99856 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.47■□□□□ 0.55
ARID3AQ99856 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARID3AQ99856 NCF1C-201ENST00000438382 1427 ntBASIC18.47■□□□□ 0.55
ARID3AQ99856 MYO15B-237ENST00000642007 4893 ntBASIC18.47■□□□□ 0.55
ARID3AQ99856 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
ARID3AQ99856 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ARID3AQ99856 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARID3AQ99856 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARID3AQ99856 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
ARID3AQ99856 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.46■□□□□ 0.55
ARID3AQ99856 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
ARID3AQ99856 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ARID3AQ99856 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ARID3AQ99856 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
ARID3AQ99856 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ARID3AQ99856 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ARID3AQ99856 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC18.46■□□□□ 0.55
ARID3AQ99856 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ARID3AQ99856 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.46■□□□□ 0.55
ARID3AQ99856 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
ARID3AQ99856 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.46■□□□□ 0.55
ARID3AQ99856 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ARID3AQ99856 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ARID3AQ99856 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ARID3AQ99856 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.46■□□□□ 0.55
ARID3AQ99856 AC018712.1-201ENST00000455767 687 ntBASIC18.46■□□□□ 0.55
ARID3AQ99856 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.46■□□□□ 0.55
ARID3AQ99856 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ARID3AQ99856 AP002469.2-201ENST00000531724 424 ntBASIC18.46■□□□□ 0.55
ARID3AQ99856 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
ARID3AQ99856 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
ARID3AQ99856 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ARID3AQ99856 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms