Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRCH3Q96II8 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRCH3Q96II8 AHCYP2-201ENST00000430630 1300 ntBASIC17.37■□□□□ 0.37
LRCH3Q96II8 AC134312.5-201ENST00000568031 1313 ntBASIC17.37■□□□□ 0.37
LRCH3Q96II8 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
LRCH3Q96II8 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.37■□□□□ 0.37
LRCH3Q96II8 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRCH3Q96II8 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRCH3Q96II8 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.37■□□□□ 0.37
LRCH3Q96II8 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRCH3Q96II8 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
LRCH3Q96II8 KRT18P55-202ENST00000578578 1546 ntBASIC17.37■□□□□ 0.37
LRCH3Q96II8 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH3Q96II8 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH3Q96II8 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH3Q96II8 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH3Q96II8 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.36■□□□□ 0.37
LRCH3Q96II8 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.36■□□□□ 0.37
LRCH3Q96II8 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.36■□□□□ 0.37
LRCH3Q96II8 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH3Q96II8 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH3Q96II8 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.36■□□□□ 0.37
LRCH3Q96II8 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH3Q96II8 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
LRCH3Q96II8 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH3Q96II8 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH3Q96II8 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
LRCH3Q96II8 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LRCH3Q96II8 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH3Q96II8 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LRCH3Q96II8 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC17.36■□□□□ 0.37
LRCH3Q96II8 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC17.36■□□□□ 0.37
LRCH3Q96II8 RPL13AP19-201ENST00000434320 584 ntBASIC17.36■□□□□ 0.37
LRCH3Q96II8 AC069218.1-201ENST00000435269 762 ntBASIC17.36■□□□□ 0.37
LRCH3Q96II8 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC17.36■□□□□ 0.37
LRCH3Q96II8 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC17.36■□□□□ 0.37
LRCH3Q96II8 MAGEA5-201ENST00000446757 942 ntBASIC17.36■□□□□ 0.37
LRCH3Q96II8 AC104784.1-201ENST00000473096 294 ntBASIC17.36■□□□□ 0.37
LRCH3Q96II8 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.36■□□□□ 0.37
LRCH3Q96II8 ENPP7P5-201ENST00000541031 1031 ntBASIC17.36■□□□□ 0.37
LRCH3Q96II8 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC17.36■□□□□ 0.37
LRCH3Q96II8 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH3Q96II8 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC17.36■□□□□ 0.37
LRCH3Q96II8 AL158212.4-201ENST00000624062 1286 ntBASIC17.36■□□□□ 0.37
LRCH3Q96II8 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.36■□□□□ 0.37
LRCH3Q96II8 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
LRCH3Q96II8 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LRCH3Q96II8 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH3Q96II8 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.36■□□□□ 0.37
LRCH3Q96II8 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH3Q96II8 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH3Q96II8 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.36■□□□□ 0.37
LRCH3Q96II8 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH3Q96II8 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
LRCH3Q96II8 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
LRCH3Q96II8 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
LRCH3Q96II8 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH3Q96II8 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.36■□□□□ 0.37
LRCH3Q96II8 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH3Q96II8 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH3Q96II8 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LRCH3Q96II8 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRCH3Q96II8 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRCH3Q96II8 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRCH3Q96II8 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
LRCH3Q96II8 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
LRCH3Q96II8 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
LRCH3Q96II8 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.35■□□□□ 0.37
LRCH3Q96II8 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRCH3Q96II8 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.35■□□□□ 0.37
LRCH3Q96II8 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.35■□□□□ 0.37
LRCH3Q96II8 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.35■□□□□ 0.37
LRCH3Q96II8 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRCH3Q96II8 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.35■□□□□ 0.37
LRCH3Q96II8 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LRCH3Q96II8 NDUFV2P1-201ENST00000596415 907 ntBASIC17.35■□□□□ 0.37
LRCH3Q96II8 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC17.35■□□□□ 0.37
LRCH3Q96II8 CU633904.3-201ENST00000624042 1029 ntBASIC17.35■□□□□ 0.37
LRCH3Q96II8 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.35■□□□□ 0.37
LRCH3Q96II8 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRCH3Q96II8 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.35■□□□□ 0.37
LRCH3Q96II8 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LRCH3Q96II8 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.35■□□□□ 0.37
LRCH3Q96II8 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LRCH3Q96II8 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.35■□□□□ 0.37
LRCH3Q96II8 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRCH3Q96II8 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRCH3Q96II8 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRCH3Q96II8 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRCH3Q96II8 LYSMD4-203ENST00000378904 2122 ntBASIC17.35■□□□□ 0.37
LRCH3Q96II8 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRCH3Q96II8 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRCH3Q96II8 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRCH3Q96II8 AD000864.1-201ENST00000624076 2295 ntBASIC17.35■□□□□ 0.37
LRCH3Q96II8 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRCH3Q96II8 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
LRCH3Q96II8 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRCH3Q96II8 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRCH3Q96II8 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRCH3Q96II8 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms