Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 ATP6V0CP2-201ENST00000469409 207 ntBASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 AC024681.1-201ENST00000521917 487 ntBASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 RN7SL8P-201ENST00000461771 266 ntBASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 BX539320.1-201ENST00000623759 877 ntBASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 TUBBP5-203ENST00000508529 1334 ntBASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 KLF2P2-201ENST00000416807 1039 ntBASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 HNRNPA1P63-201ENST00000427917 963 ntBASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 KRT18P25-201ENST00000508931 1278 ntBASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 RN7SL713P-201ENST00000582127 302 ntBASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 PCDHB18P-201ENST00000524813 2368 ntBASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 TISP43-201ENST00000409793 538 ntTSL 4 BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 FGFR3P1-201ENST00000449999 601 ntBASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 RN7SL774P-201ENST00000577467 290 ntBASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ALMS1Q8TCU4 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC10.59□□□□□ -0.71
ALMS1Q8TCU4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
ALMS1Q8TCU4 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
ALMS1Q8TCU4 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
ALMS1Q8TCU4 MPV17-205ENST00000402310 906 ntTSL 5 BASIC10.59□□□□□ -0.71
ALMS1Q8TCU4 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
ALMS1Q8TCU4 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC10.59□□□□□ -0.71
ALMS1Q8TCU4 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC10.59□□□□□ -0.71
ALMS1Q8TCU4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms