Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LSMEM1Q8N8F7 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
LSMEM1Q8N8F7 AC026396.1-201ENST00000419388 421 ntBASIC14.83□□□□□ -0.04
LSMEM1Q8N8F7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.83□□□□□ -0.04
LSMEM1Q8N8F7 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.83□□□□□ -0.04
LSMEM1Q8N8F7 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LSMEM1Q8N8F7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.83□□□□□ -0.04
LSMEM1Q8N8F7 AC092384.3-202ENST00000564646 2873 ntBASIC14.83□□□□□ -0.04
LSMEM1Q8N8F7 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.83□□□□□ -0.04
LSMEM1Q8N8F7 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LSMEM1Q8N8F7 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
LSMEM1Q8N8F7 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
LSMEM1Q8N8F7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.83□□□□□ -0.04
LSMEM1Q8N8F7 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LSMEM1Q8N8F7 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LSMEM1Q8N8F7 NFIC-211ENST00000641145 8399 ntBASIC14.83□□□□□ -0.04
LSMEM1Q8N8F7 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.83□□□□□ -0.04
LSMEM1Q8N8F7 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LSMEM1Q8N8F7 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LSMEM1Q8N8F7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LSMEM1Q8N8F7 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 AC011477.6-201ENST00000604980 1927 ntBASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 PAUPAR-201ENST00000630360 2965 ntBASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
LSMEM1Q8N8F7 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 AC098859.1-201ENST00000502915 1238 ntBASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 AC105233.2-201ENST00000523697 349 ntBASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 AF228730.5-201ENST00000530288 346 ntBASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms