Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SIX5Q8N196 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SIX5Q8N196 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIX5Q8N196 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIX5Q8N196 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIX5Q8N196 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.5■□□□□ 0.23
SIX5Q8N196 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIX5Q8N196 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SIX5Q8N196 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SIX5Q8N196 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIX5Q8N196 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIX5Q8N196 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SIX5Q8N196 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SIX5Q8N196 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
SIX5Q8N196 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SIX5Q8N196 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SIX5Q8N196 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SIX5Q8N196 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIX5Q8N196 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.5■□□□□ 0.23
SIX5Q8N196 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIX5Q8N196 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIX5Q8N196 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SIX5Q8N196 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.5■□□□□ 0.23
SIX5Q8N196 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SIX5Q8N196 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.5■□□□□ 0.23
SIX5Q8N196 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SIX5Q8N196 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.5■□□□□ 0.23
SIX5Q8N196 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.5■□□□□ 0.23
SIX5Q8N196 RN7SL399P-201ENST00000471648 279 ntBASIC16.5■□□□□ 0.23
SIX5Q8N196 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.5■□□□□ 0.23
SIX5Q8N196 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
SIX5Q8N196 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
SIX5Q8N196 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.5■□□□□ 0.23
SIX5Q8N196 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SIX5Q8N196 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIX5Q8N196 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SIX5Q8N196 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIX5Q8N196 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIX5Q8N196 FLJ16779-201ENST00000612722 7638 ntBASIC16.5■□□□□ 0.23
SIX5Q8N196 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIX5Q8N196 OR6D1P-203ENST00000641209 4860 ntBASIC16.5■□□□□ 0.23
SIX5Q8N196 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIX5Q8N196 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIX5Q8N196 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIX5Q8N196 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SIX5Q8N196 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SIX5Q8N196 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.5■□□□□ 0.23
SIX5Q8N196 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIX5Q8N196 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIX5Q8N196 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIX5Q8N196 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIX5Q8N196 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIX5Q8N196 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.49■□□□□ 0.23
SIX5Q8N196 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.49■□□□□ 0.23
SIX5Q8N196 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIX5Q8N196 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIX5Q8N196 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIX5Q8N196 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIX5Q8N196 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIX5Q8N196 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SIX5Q8N196 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.49■□□□□ 0.23
SIX5Q8N196 GOLGA2P4-201ENST00000441462 777 ntBASIC16.49■□□□□ 0.23
SIX5Q8N196 BCRP2-202ENST00000447763 634 ntBASIC16.49■□□□□ 0.23
SIX5Q8N196 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SIX5Q8N196 FO681548.1-201ENST00000455617 1132 ntBASIC16.49■□□□□ 0.23
SIX5Q8N196 PFN1P12-201ENST00000455938 534 ntBASIC16.49■□□□□ 0.23
SIX5Q8N196 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.49■□□□□ 0.23
SIX5Q8N196 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.49■□□□□ 0.23
SIX5Q8N196 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.49■□□□□ 0.23
SIX5Q8N196 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.49■□□□□ 0.23
SIX5Q8N196 BCRP6-201ENST00000510112 632 ntBASIC16.49■□□□□ 0.23
SIX5Q8N196 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.49■□□□□ 0.23
SIX5Q8N196 BCRP7-201ENST00000511549 544 ntBASIC16.49■□□□□ 0.23
SIX5Q8N196 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
SIX5Q8N196 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.49■□□□□ 0.23
SIX5Q8N196 AC243960.2-201ENST00000600996 747 ntBASIC16.49■□□□□ 0.23
SIX5Q8N196 AC133539.2-201ENST00000604757 467 ntBASIC16.49■□□□□ 0.23
SIX5Q8N196 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.49■□□□□ 0.23
SIX5Q8N196 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.49■□□□□ 0.23
SIX5Q8N196 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.49■□□□□ 0.23
SIX5Q8N196 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.49■□□□□ 0.23
SIX5Q8N196 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SIX5Q8N196 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SIX5Q8N196 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIX5Q8N196 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SIX5Q8N196 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.49■□□□□ 0.23
SIX5Q8N196 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SIX5Q8N196 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SIX5Q8N196 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIX5Q8N196 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SIX5Q8N196 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIX5Q8N196 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.48■□□□□ 0.23
SIX5Q8N196 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIX5Q8N196 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SIX5Q8N196 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIX5Q8N196 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIX5Q8N196 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIX5Q8N196 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIX5Q8N196 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIX5Q8N196 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms