Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL27A1Q8IZC6 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
COL27A1Q8IZC6 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.85□□□□□ -0.03
COL27A1Q8IZC6 AL096828.3-201ENST00000615354 462 ntBASIC14.85□□□□□ -0.03
COL27A1Q8IZC6 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
COL27A1Q8IZC6 AC120498.9-201ENST00000339021 3867 ntBASIC14.85□□□□□ -0.03
COL27A1Q8IZC6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL27A1Q8IZC6 AGGF1P2-201ENST00000426656 2106 ntBASIC14.85□□□□□ -0.03
COL27A1Q8IZC6 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL27A1Q8IZC6 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
COL27A1Q8IZC6 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.85□□□□□ -0.03
COL27A1Q8IZC6 MTHFR-217ENST00000641820 1569 ntBASIC14.85□□□□□ -0.03
COL27A1Q8IZC6 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
COL27A1Q8IZC6 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
COL27A1Q8IZC6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL27A1Q8IZC6 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 C2orf27AP3-201ENST00000434123 579 ntBASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 RNA5SP423-201ENST00000517127 109 ntBASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 AC105129.2-201ENST00000559536 390 ntBASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 ECM1P1-201ENST00000604092 1279 ntBASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 AL354718.3-201ENST00000616414 581 ntBASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 CR382287.1-201ENST00000623954 586 ntBASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 RPSAP36-202ENST00000494591 1261 ntBASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
COL27A1Q8IZC6 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
COL27A1Q8IZC6 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
COL27A1Q8IZC6 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.83□□□□□ -0.03
COL27A1Q8IZC6 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL27A1Q8IZC6 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
COL27A1Q8IZC6 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.83□□□□□ -0.04
COL27A1Q8IZC6 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
COL27A1Q8IZC6 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL27A1Q8IZC6 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
COL27A1Q8IZC6 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL27A1Q8IZC6 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
COL27A1Q8IZC6 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL27A1Q8IZC6 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC14.83□□□□□ -0.04
COL27A1Q8IZC6 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.83□□□□□ -0.04
COL27A1Q8IZC6 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.83□□□□□ -0.04
COL27A1Q8IZC6 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL27A1Q8IZC6 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.83□□□□□ -0.04
COL27A1Q8IZC6 CHMP4BP1-201ENST00000556017 588 ntBASIC14.83□□□□□ -0.04
COL27A1Q8IZC6 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC14.83□□□□□ -0.04
COL27A1Q8IZC6 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.83□□□□□ -0.04
COL27A1Q8IZC6 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.83□□□□□ -0.04
COL27A1Q8IZC6 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.83□□□□□ -0.04
COL27A1Q8IZC6 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.83□□□□□ -0.04
COL27A1Q8IZC6 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.83□□□□□ -0.04
COL27A1Q8IZC6 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
COL27A1Q8IZC6 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL27A1Q8IZC6 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
COL27A1Q8IZC6 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL27A1Q8IZC6 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL27A1Q8IZC6 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL27A1Q8IZC6 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL27A1Q8IZC6 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC14.83□□□□□ -0.04
COL27A1Q8IZC6 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 ACKR1-201ENST00000368121 1240 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms