Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 MIR346-201ENST00000362234 95 ntBASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 HAUS4P1-201ENST00000406739 1145 ntBASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 BX842568.4-201ENST00000421222 227 ntBASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 AC142381.1-201ENST00000426099 345 ntBASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 PAX6-247ENST00000638965 979 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 RPSAP43-201ENST00000402237 625 ntBASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 GPX1P2-201ENST00000429271 606 ntBASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 AC105339.1-204ENST00000636249 355 ntBASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC116Q8IYX3 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC116Q8IYX3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC116Q8IYX3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC116Q8IYX3 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC116Q8IYX3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC116Q8IYX3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC116Q8IYX3 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC116Q8IYX3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.23■□□□□ 0.03
CCDC116Q8IYX3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC116Q8IYX3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CCDC116Q8IYX3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC116Q8IYX3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CCDC116Q8IYX3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms