Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS4Q8IUM7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 HAUS4P1-201ENST00000406739 1145 ntBASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 RPL7P3-201ENST00000441388 714 ntBASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 FO681548.1-201ENST00000455617 1132 ntBASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 FAM8A2P-201ENST00000528813 1142 ntBASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 AC009486.1-201ENST00000569860 813 ntBASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 MIR4538-201ENST00000581377 78 ntBASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
NPAS4Q8IUM7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 VDAC1P7-201ENST00000462417 847 ntBASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 RNA5SP412-201ENST00000516234 123 ntBASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 AL450472.2-201ENST00000603663 1156 ntBASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 TUBB1P2-201ENST00000422712 1306 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms