Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 AL512356.2-201ENST00000546955 174 ntBASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 AC003101.2-201ENST00000612557 442 ntBASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 Z92544.3-201ENST00000624747 417 ntBASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 AC245100.5-201ENST00000452108 331 ntBASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 MIR4453-201ENST00000584019 89 ntBASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD3Q7Z3D4 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 AL513523.2-202ENST00000427283 2040 ntBASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 SPDYE7P-202ENST00000420373 878 ntBASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 AL353705.2-201ENST00000428243 662 ntBASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 RFPL4AP1-201ENST00000530883 850 ntBASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 AC069262.1-201ENST00000539058 672 ntBASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms