Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 ACTG1P14-201ENST00000446382 1122 ntBASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 SPTSSB-204ENST00000617024 1292 ntBASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 C20orf181-201ENST00000623918 480 ntBASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.22□□□□□ -0.13
HIST2H3AQ71DI3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 MIR346-201ENST00000362234 95 ntBASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 MIR940-201ENST00000401276 94 ntBASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 MKNK2P1-201ENST00000437526 628 ntBASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 RN7SL589P-201ENST00000481268 310 ntBASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 POLD2P1-201ENST00000511220 997 ntBASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 AC243562.1-201ENST00000560672 389 ntBASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 AC027307.2-201ENST00000591252 911 ntBASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HIST2H3AQ71DI3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
HIST2H3AQ71DI3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HIST2H3AQ71DI3 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
HIST2H3AQ71DI3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
HIST2H3AQ71DI3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.21□□□□□ -0.14
HIST2H3AQ71DI3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HIST2H3AQ71DI3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms