Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 SLC25A3P1-201ENST00000443844 931 ntBASIC15.26■□□□□ 0.03
LPCAT4Q643R3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 AC009533.2-201ENST00000543664 586 ntBASIC15.26■□□□□ 0.03
LPCAT4Q643R3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 AC140479.7-201ENST00000636301 2332 ntBASIC15.25■□□□□ 0.03
LPCAT4Q643R3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 DET1-205ENST00000558413 583 ntTSL 4 BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 LINC01238-205ENST00000567549 1107 ntBASIC15.25■□□□□ 0.03
LPCAT4Q643R3 AC011840.4-201ENST00000578471 627 ntBASIC15.25■□□□□ 0.03
LPCAT4Q643R3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 AC011467.2-201ENST00000598425 242 ntBASIC15.25■□□□□ 0.03
LPCAT4Q643R3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LPCAT4Q643R3 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LPCAT4Q643R3 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
LPCAT4Q643R3 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.24■□□□□ 0.03
LPCAT4Q643R3 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LPCAT4Q643R3 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LPCAT4Q643R3 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LPCAT4Q643R3 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LPCAT4Q643R3 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
LPCAT4Q643R3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
LPCAT4Q643R3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.24■□□□□ 0.03
LPCAT4Q643R3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LPCAT4Q643R3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
LPCAT4Q643R3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.24■□□□□ 0.03
LPCAT4Q643R3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LPCAT4Q643R3 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LPCAT4Q643R3 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms