Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
CCDC93Q567U6 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC19.67■□□□□ 0.74
CCDC93Q567U6 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC93Q567U6 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC93Q567U6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC93Q567U6 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC93Q567U6 AC005622.1-201ENST00000636801 1703 ntBASIC19.67■□□□□ 0.74
CCDC93Q567U6 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CCDC93Q567U6 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC93Q567U6 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC93Q567U6 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC93Q567U6 PCGF3-213ENST00000620529 1899 ntBASIC19.67■□□□□ 0.74
CCDC93Q567U6 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.66■□□□□ 0.74
CCDC93Q567U6 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC93Q567U6 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC93Q567U6 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CCDC93Q567U6 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC93Q567U6 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC93Q567U6 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC93Q567U6 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC93Q567U6 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC93Q567U6 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC93Q567U6 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CCDC93Q567U6 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC93Q567U6 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC93Q567U6 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC93Q567U6 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CCDC93Q567U6 MIR1247-201ENST00000408206 136 ntBASIC19.66■□□□□ 0.74
CCDC93Q567U6 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC93Q567U6 HLA-DPB2-205ENST00000435074 1188 ntBASIC19.66■□□□□ 0.74
CCDC93Q567U6 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC93Q567U6 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC19.66■□□□□ 0.74
CCDC93Q567U6 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC19.66■□□□□ 0.74
CCDC93Q567U6 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC93Q567U6 AC124283.3-201ENST00000570869 594 ntBASIC19.66■□□□□ 0.74
CCDC93Q567U6 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC19.66■□□□□ 0.74
CCDC93Q567U6 MIR3615-201ENST00000581999 87 ntBASIC19.66■□□□□ 0.74
CCDC93Q567U6 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC93Q567U6 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC93Q567U6 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC93Q567U6 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC93Q567U6 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC93Q567U6 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC93Q567U6 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC93Q567U6 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC93Q567U6 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC93Q567U6 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC93Q567U6 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC93Q567U6 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC93Q567U6 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC93Q567U6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CCDC93Q567U6 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC93Q567U6 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC93Q567U6 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC93Q567U6 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CCDC93Q567U6 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC93Q567U6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC93Q567U6 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC93Q567U6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC93Q567U6 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC93Q567U6 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC93Q567U6 INTS4P2-202ENST00000614726 2019 ntBASIC19.65■□□□□ 0.74
CCDC93Q567U6 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC93Q567U6 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC93Q567U6 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC93Q567U6 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC93Q567U6 MPV17-206ENST00000402722 827 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC93Q567U6 SOCS2P1-201ENST00000417727 557 ntBASIC19.65■□□□□ 0.74
CCDC93Q567U6 GPAA1P2-201ENST00000417923 928 ntBASIC19.65■□□□□ 0.74
CCDC93Q567U6 AC134915.1-201ENST00000426461 574 ntBASIC19.65■□□□□ 0.74
CCDC93Q567U6 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC93Q567U6 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC93Q567U6 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC93Q567U6 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC93Q567U6 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC93Q567U6 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
CCDC93Q567U6 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC19.65■□□□□ 0.74
CCDC93Q567U6 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC19.65■□□□□ 0.74
CCDC93Q567U6 AC010328.2-201ENST00000597698 1111 ntBASIC19.65■□□□□ 0.74
CCDC93Q567U6 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC93Q567U6 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CCDC93Q567U6 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC93Q567U6 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC93Q567U6 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC93Q567U6 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC93Q567U6 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC93Q567U6 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC93Q567U6 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC93Q567U6 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC93Q567U6 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC93Q567U6 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC93Q567U6 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC93Q567U6 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC93Q567U6 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC93Q567U6 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCDC93Q567U6 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
CCDC93Q567U6 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
CCDC93Q567U6 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
CCDC93Q567U6 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC93Q567U6 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 934.4 ms