Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
CHRFAM7AQ494W8 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 OR2I1P-209ENST00000641730 5365 ntBASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 RHOQP3-201ENST00000437982 621 ntBASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 INGX-202ENST00000489074 768 ntBASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 AF228730.6-201ENST00000641497 218 ntBASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 AC084121.3-201ENST00000641716 218 ntBASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 AC105233.6-201ENST00000642093 218 ntBASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.22□□□□□ -0.13
CHRFAM7AQ494W8 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CHRFAM7AQ494W8 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHRFAM7AQ494W8 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.21□□□□□ -0.13
CHRFAM7AQ494W8 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
CHRFAM7AQ494W8 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHRFAM7AQ494W8 AC005052.1-201ENST00000625181 2492 ntBASIC14.21□□□□□ -0.13
CHRFAM7AQ494W8 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
CHRFAM7AQ494W8 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHRFAM7AQ494W8 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CHRFAM7AQ494W8 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.21□□□□□ -0.13
CHRFAM7AQ494W8 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHRFAM7AQ494W8 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.21□□□□□ -0.13
CHRFAM7AQ494W8 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.21□□□□□ -0.13
CHRFAM7AQ494W8 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.21□□□□□ -0.13
CHRFAM7AQ494W8 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.21□□□□□ -0.13
CHRFAM7AQ494W8 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
CHRFAM7AQ494W8 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.21□□□□□ -0.13
CHRFAM7AQ494W8 AC093214.1-201ENST00000511688 1107 ntBASIC14.21□□□□□ -0.13
CHRFAM7AQ494W8 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.21□□□□□ -0.13
CHRFAM7AQ494W8 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.21□□□□□ -0.13
CHRFAM7AQ494W8 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.21□□□□□ -0.13
CHRFAM7AQ494W8 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.21□□□□□ -0.13
CHRFAM7AQ494W8 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.21□□□□□ -0.13
CHRFAM7AQ494W8 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.21□□□□□ -0.13
CHRFAM7AQ494W8 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.21□□□□□ -0.13
CHRFAM7AQ494W8 AC068137.2-201ENST00000605408 478 ntBASIC14.21□□□□□ -0.13
CHRFAM7AQ494W8 REXO1L3P-201ENST00000622202 1288 ntBASIC14.21□□□□□ -0.13
CHRFAM7AQ494W8 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.21□□□□□ -0.13
CHRFAM7AQ494W8 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.21□□□□□ -0.13
CHRFAM7AQ494W8 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CHRFAM7AQ494W8 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.21□□□□□ -0.13
CHRFAM7AQ494W8 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CHRFAM7AQ494W8 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.21□□□□□ -0.13
CHRFAM7AQ494W8 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
CHRFAM7AQ494W8 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHRFAM7AQ494W8 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.21□□□□□ -0.13
CHRFAM7AQ494W8 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
CHRFAM7AQ494W8 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CHRFAM7AQ494W8 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CHRFAM7AQ494W8 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CHRFAM7AQ494W8 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.21□□□□□ -0.14
CHRFAM7AQ494W8 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
CHRFAM7AQ494W8 AC024909.3-201ENST00000611513 2257 ntBASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms