Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 HCG4-201ENST00000418983 998 ntBASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 GPX1P2-201ENST00000429271 606 ntBASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 AL031432.2-201ENST00000566714 459 ntBASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 AL928711.1-201ENST00000570165 459 ntBASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 AC006538.3-201ENST00000612495 578 ntBASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 REXO1L3P-201ENST00000622202 1288 ntBASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 C20orf181-201ENST00000623918 480 ntBASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 AP001350.2-201ENST00000625104 1094 ntBASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 LINC02228-204ENST00000642115 2962 ntBASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 MKNK2P1-201ENST00000437526 628 ntBASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 AC005829.1-201ENST00000570002 483 ntBASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 MIR4515-201ENST00000584082 81 ntBASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 AC010327.4-202ENST00000591484 748 ntBASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 AL513190.1-201ENST00000621254 727 ntBASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 AC079781.4-201ENST00000641908 219 ntBASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 AC092865.6-201ENST00000642101 219 ntBASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCGF3Q3KNV8 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 AC022532.1-201ENST00000624563 1728 ntBASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms