Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GABPAQ06546 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GABPAQ06546 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GABPAQ06546 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.79■□□□□ 0.6
GABPAQ06546 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
GABPAQ06546 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
GABPAQ06546 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.79■□□□□ 0.6
GABPAQ06546 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
GABPAQ06546 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.79■□□□□ 0.6
GABPAQ06546 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.79■□□□□ 0.6
GABPAQ06546 TMEM261P1-201ENST00000604899 340 ntBASIC18.79■□□□□ 0.6
GABPAQ06546 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.79■□□□□ 0.6
GABPAQ06546 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.79■□□□□ 0.6
GABPAQ06546 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.79■□□□□ 0.6
GABPAQ06546 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.79■□□□□ 0.6
GABPAQ06546 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GABPAQ06546 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.79■□□□□ 0.6
GABPAQ06546 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GABPAQ06546 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
GABPAQ06546 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.79■□□□□ 0.6
GABPAQ06546 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
GABPAQ06546 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GABPAQ06546 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GABPAQ06546 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GABPAQ06546 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GABPAQ06546 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GABPAQ06546 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
GABPAQ06546 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.78■□□□□ 0.6
GABPAQ06546 PCDHA14-201ENST00000506751 2298 ntBASIC18.78■□□□□ 0.6
GABPAQ06546 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GABPAQ06546 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.78■□□□□ 0.6
GABPAQ06546 GK-202ENST00000378941 458 ntTSL 3 BASIC18.78■□□□□ 0.6
GABPAQ06546 MIR648-201ENST00000385046 94 ntBASIC18.78■□□□□ 0.6
GABPAQ06546 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
GABPAQ06546 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.78■□□□□ 0.6
GABPAQ06546 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
GABPAQ06546 TOMM22P5-201ENST00000416399 439 ntBASIC18.78■□□□□ 0.6
GABPAQ06546 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.78■□□□□ 0.6
GABPAQ06546 KRT18P64-201ENST00000434946 1219 ntBASIC18.78■□□□□ 0.6
GABPAQ06546 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.78■□□□□ 0.6
GABPAQ06546 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.78■□□□□ 0.6
GABPAQ06546 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.78■□□□□ 0.6
GABPAQ06546 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.78■□□□□ 0.6
GABPAQ06546 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.78■□□□□ 0.6
GABPAQ06546 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.78■□□□□ 0.6
GABPAQ06546 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GABPAQ06546 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
GABPAQ06546 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.78■□□□□ 0.6
GABPAQ06546 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GABPAQ06546 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GABPAQ06546 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
GABPAQ06546 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GABPAQ06546 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GABPAQ06546 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.78■□□□□ 0.6
GABPAQ06546 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GABPAQ06546 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GABPAQ06546 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
GABPAQ06546 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GABPAQ06546 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.77■□□□□ 0.6
GABPAQ06546 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.77■□□□□ 0.6
GABPAQ06546 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
GABPAQ06546 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
GABPAQ06546 CDC14C-201ENST00000428251 1719 ntBASIC18.77■□□□□ 0.6
GABPAQ06546 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GABPAQ06546 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GABPAQ06546 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.77■□□□□ 0.6
GABPAQ06546 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GABPAQ06546 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GABPAQ06546 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GABPAQ06546 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
GABPAQ06546 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GABPAQ06546 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.77■□□□□ 0.6
GABPAQ06546 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.77■□□□□ 0.6
GABPAQ06546 RN7SL752P-201ENST00000463779 287 ntBASIC18.77■□□□□ 0.6
GABPAQ06546 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.77■□□□□ 0.6
GABPAQ06546 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
GABPAQ06546 AC132938.2-201ENST00000579188 680 ntBASIC18.77■□□□□ 0.6
GABPAQ06546 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.77■□□□□ 0.6
GABPAQ06546 AL450472.2-201ENST00000603663 1156 ntBASIC18.77■□□□□ 0.6
GABPAQ06546 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.77■□□□□ 0.6
GABPAQ06546 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GABPAQ06546 AL591163.1-201ENST00000641757 987 ntBASIC18.77■□□□□ 0.6
GABPAQ06546 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GABPAQ06546 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.77■□□□□ 0.6
GABPAQ06546 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
GABPAQ06546 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.77■□□□□ 0.59
GABPAQ06546 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
GABPAQ06546 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.77■□□□□ 0.59
GABPAQ06546 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GABPAQ06546 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GABPAQ06546 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.76■□□□□ 0.59
GABPAQ06546 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GABPAQ06546 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.76■□□□□ 0.59
GABPAQ06546 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GABPAQ06546 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
GABPAQ06546 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GABPAQ06546 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GABPAQ06546 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.76■□□□□ 0.59
GABPAQ06546 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
GABPAQ06546 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms