Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.46■□□□□ 0.39
SNRPFP62306 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.46■□□□□ 0.39
SNRPFP62306 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.46■□□□□ 0.39
SNRPFP62306 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNRPFP62306 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.46■□□□□ 0.39
SNRPFP62306 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNRPFP62306 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNRPFP62306 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SNRPFP62306 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNRPFP62306 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SNRPFP62306 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.46■□□□□ 0.39
SNRPFP62306 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.46■□□□□ 0.39
SNRPFP62306 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.46■□□□□ 0.38
SNRPFP62306 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
SNRPFP62306 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
SNRPFP62306 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
SNRPFP62306 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SNRPFP62306 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SNRPFP62306 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.45■□□□□ 0.38
SNRPFP62306 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SNRPFP62306 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.45■□□□□ 0.38
SNRPFP62306 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNRPFP62306 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNRPFP62306 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNRPFP62306 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNRPFP62306 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.45■□□□□ 0.38
SNRPFP62306 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.45■□□□□ 0.38
SNRPFP62306 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SNRPFP62306 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNRPFP62306 FO538757.1-201ENST00000623083 1397 ntBASIC17.45■□□□□ 0.38
SNRPFP62306 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNRPFP62306 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNRPFP62306 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.45■□□□□ 0.38
SNRPFP62306 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SNRPFP62306 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
SNRPFP62306 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.45■□□□□ 0.38
SNRPFP62306 HIST3H2BA-201ENST00000436555 524 ntBASIC17.45■□□□□ 0.38
SNRPFP62306 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.45■□□□□ 0.38
SNRPFP62306 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNRPFP62306 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.45■□□□□ 0.38
SNRPFP62306 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.45■□□□□ 0.38
SNRPFP62306 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SNRPFP62306 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.45■□□□□ 0.38
SNRPFP62306 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.45■□□□□ 0.38
SNRPFP62306 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNRPFP62306 MIR6069-201ENST00000620069 79 ntBASIC17.45■□□□□ 0.38
SNRPFP62306 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNRPFP62306 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNRPFP62306 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SNRPFP62306 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SNRPFP62306 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SNRPFP62306 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SNRPFP62306 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.45■□□□□ 0.38
SNRPFP62306 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.45■□□□□ 0.38
SNRPFP62306 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SNRPFP62306 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SNRPFP62306 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNRPFP62306 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SNRPFP62306 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
SNRPFP62306 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNRPFP62306 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNRPFP62306 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNRPFP62306 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNRPFP62306 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNRPFP62306 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNRPFP62306 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNRPFP62306 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNRPFP62306 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.44■□□□□ 0.38
SNRPFP62306 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.44■□□□□ 0.38
SNRPFP62306 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNRPFP62306 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SNRPFP62306 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.44■□□□□ 0.38
SNRPFP62306 AL080243.2-201ENST00000418783 582 ntBASIC17.44■□□□□ 0.38
SNRPFP62306 AC107890.1-201ENST00000422478 521 ntBASIC17.44■□□□□ 0.38
SNRPFP62306 FAM86GP-201ENST00000448322 971 ntBASIC17.44■□□□□ 0.38
SNRPFP62306 AC125807.1-201ENST00000483097 614 ntBASIC17.44■□□□□ 0.38
SNRPFP62306 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNRPFP62306 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.44■□□□□ 0.38
SNRPFP62306 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.44■□□□□ 0.38
SNRPFP62306 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.44■□□□□ 0.38
SNRPFP62306 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.44■□□□□ 0.38
SNRPFP62306 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.44■□□□□ 0.38
SNRPFP62306 AL158211.3-201ENST00000607385 239 ntBASIC17.44■□□□□ 0.38
SNRPFP62306 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.44■□□□□ 0.38
SNRPFP62306 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNRPFP62306 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNRPFP62306 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNRPFP62306 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SNRPFP62306 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.44■□□□□ 0.38
SNRPFP62306 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNRPFP62306 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNRPFP62306 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SNRPFP62306 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.44■□□□□ 0.38
SNRPFP62306 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNRPFP62306 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNRPFP62306 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SNRPFP62306 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SNRPFP62306 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNRPFP62306 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SNRPFP62306 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms