Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.2■□□□□ 0.18
AP1S1P61966 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP1S1P61966 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.2■□□□□ 0.18
AP1S1P61966 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.2■□□□□ 0.18
AP1S1P61966 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.2■□□□□ 0.18
AP1S1P61966 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.2■□□□□ 0.18
AP1S1P61966 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.2■□□□□ 0.18
AP1S1P61966 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP1S1P61966 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.2■□□□□ 0.18
AP1S1P61966 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP1S1P61966 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP1S1P61966 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP1S1P61966 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
AP1S1P61966 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP1S1P61966 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP1S1P61966 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP1S1P61966 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP1S1P61966 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP1S1P61966 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.2■□□□□ 0.18
AP1S1P61966 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
AP1S1P61966 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP1S1P61966 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP1S1P61966 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
AP1S1P61966 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.19■□□□□ 0.18
AP1S1P61966 LINC02447-202ENST00000501888 2146 ntBASIC16.19■□□□□ 0.18
AP1S1P61966 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
AP1S1P61966 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP1S1P61966 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP1S1P61966 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP1S1P61966 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP1S1P61966 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP1S1P61966 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP1S1P61966 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP1S1P61966 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
AP1S1P61966 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP1S1P61966 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP1S1P61966 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP1S1P61966 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP1S1P61966 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
AP1S1P61966 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP1S1P61966 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP1S1P61966 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.19■□□□□ 0.18
AP1S1P61966 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP1S1P61966 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP1S1P61966 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP1S1P61966 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP1S1P61966 MIR770-201ENST00000390219 98 ntBASIC16.19■□□□□ 0.18
AP1S1P61966 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.19■□□□□ 0.18
AP1S1P61966 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.19■□□□□ 0.18
AP1S1P61966 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.19■□□□□ 0.18
AP1S1P61966 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.19■□□□□ 0.18
AP1S1P61966 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
AP1S1P61966 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.19■□□□□ 0.18
AP1S1P61966 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.19■□□□□ 0.18
AP1S1P61966 MIR6069-201ENST00000620069 79 ntBASIC16.19■□□□□ 0.18
AP1S1P61966 AL590560.3-201ENST00000623350 461 ntBASIC16.19■□□□□ 0.18
AP1S1P61966 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.19■□□□□ 0.18
AP1S1P61966 AL391005.1-201ENST00000623953 2435 ntBASIC16.19■□□□□ 0.18
AP1S1P61966 AL603832.2-201ENST00000566195 2125 ntBASIC16.19■□□□□ 0.18
AP1S1P61966 AC026691.1-201ENST00000602502 2017 ntBASIC16.19■□□□□ 0.18
AP1S1P61966 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP1S1P61966 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.19■□□□□ 0.18
AP1S1P61966 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP1S1P61966 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP1S1P61966 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
AP1S1P61966 AC087499.5-201ENST00000452760 1342 ntBASIC16.19■□□□□ 0.18
AP1S1P61966 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
AP1S1P61966 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S1P61966 DOC2GP-204ENST00000639052 2548 ntBASIC16.18■□□□□ 0.18
AP1S1P61966 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.18■□□□□ 0.18
AP1S1P61966 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
AP1S1P61966 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S1P61966 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
AP1S1P61966 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S1P61966 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.18■□□□□ 0.18
AP1S1P61966 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.18■□□□□ 0.18
AP1S1P61966 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S1P61966 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S1P61966 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
AP1S1P61966 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S1P61966 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
AP1S1P61966 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
AP1S1P61966 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S1P61966 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.18■□□□□ 0.18
AP1S1P61966 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S1P61966 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.18■□□□□ 0.18
AP1S1P61966 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.18■□□□□ 0.18
AP1S1P61966 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.18■□□□□ 0.18
AP1S1P61966 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.18■□□□□ 0.18
AP1S1P61966 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.18■□□□□ 0.18
AP1S1P61966 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.18■□□□□ 0.18
AP1S1P61966 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.18■□□□□ 0.18
AP1S1P61966 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.18■□□□□ 0.18
AP1S1P61966 RN7SL618P-201ENST00000477850 296 ntBASIC16.18■□□□□ 0.18
AP1S1P61966 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.18■□□□□ 0.18
AP1S1P61966 AC093214.1-201ENST00000511688 1107 ntBASIC16.18■□□□□ 0.18
AP1S1P61966 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.18■□□□□ 0.18
AP1S1P61966 RNA5SP421-201ENST00000516864 134 ntBASIC16.18■□□□□ 0.18
AP1S1P61966 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.18■□□□□ 0.18
AP1S1P61966 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms