Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC10.81□□□□□ -0.68
PCP4P48539 PITX2-213ENST00000616641 3102 ntTSL 5 BASIC10.81□□□□□ -0.68
PCP4P48539 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PCP4P48539 MYO19-203ENST00000610930 3271 ntTSL 5 BASIC10.81□□□□□ -0.68
PCP4P48539 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
PCP4P48539 NTRK3-204ENST00000360948 3004 ntTSL 5 BASIC10.81□□□□□ -0.68
PCP4P48539 ZMIZ2-215ENST00000615423 2772 ntTSL 5 BASIC10.81□□□□□ -0.68
PCP4P48539 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PCP4P48539 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
PCP4P48539 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC10.81□□□□□ -0.68
PCP4P48539 CXCL13-201ENST00000286758 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PCP4P48539 ADGRG5-202ENST00000349457 3557 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PCP4P48539 TXNRD1-214ENST00000526691 3974 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
PCP4P48539 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
PCP4P48539 IPO7-201ENST00000379719 6191 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PCP4P48539 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC10.81□□□□□ -0.68
PCP4P48539 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
PCP4P48539 M1AP-202ENST00000409585 2457 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
PCP4P48539 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
PCP4P48539 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC10.81□□□□□ -0.68
PCP4P48539 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC10.81□□□□□ -0.68
PCP4P48539 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
PCP4P48539 ACCS-201ENST00000263776 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PCP4P48539 FAM90A12P-201ENST00000519497 2375 ntBASIC10.81□□□□□ -0.68
PCP4P48539 PCDHGA7-201ENST00000518325 4605 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
PCP4P48539 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC10.81□□□□□ -0.68
PCP4P48539 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
PCP4P48539 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
PCP4P48539 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
PCP4P48539 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
PCP4P48539 TMEM94-201ENST00000314256 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PCP4P48539 DNMT1-202ENST00000359526 5206 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
PCP4P48539 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PCP4P48539 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC10.81□□□□□ -0.68
PCP4P48539 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC10.81□□□□□ -0.68
PCP4P48539 ZNF300-203ENST00000418587 3226 ntTSL 2 BASIC10.8□□□□□ -0.68
PCP4P48539 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
PCP4P48539 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PCP4P48539 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PCP4P48539 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
PCP4P48539 SDHAP1-207ENST00000440850 2000 ntBASIC10.8□□□□□ -0.68
PCP4P48539 AC097478.1-206ENST00000513572 2010 ntTSL 3 BASIC10.8□□□□□ -0.68
PCP4P48539 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
PCP4P48539 SMARCE1-202ENST00000348513 5840 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PCP4P48539 GDPD2-201ENST00000374382 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PCP4P48539 ADAM8-202ENST00000445355 3279 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
PCP4P48539 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PCP4P48539 UGT1A7-201ENST00000373426 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PCP4P48539 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
PCP4P48539 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PCP4P48539 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PCP4P48539 ZBED1P1-201ENST00000502364 1930 ntBASIC10.8□□□□□ -0.68
PCP4P48539 DKFZP434H168-201ENST00000567381 1905 ntBASIC10.8□□□□□ -0.68
PCP4P48539 MPP7-202ENST00000375719 2090 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PCP4P48539 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
PCP4P48539 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
PCP4P48539 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
PCP4P48539 AC009060.1-202ENST00000502126 2242 ntTSL 2 BASIC10.8□□□□□ -0.68
PCP4P48539 GRM4-204ENST00000535756 6670 ntTSL 5 BASIC10.8□□□□□ -0.68
PCP4P48539 SLC22A12-204ENST00000377574 3206 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PCP4P48539 ZNF831-203ENST00000637017 10953 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
PCP4P48539 TAF1C-203ENST00000541676 3502 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
PCP4P48539 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC10.8□□□□□ -0.68
PCP4P48539 SLC16A7-203ENST00000547379 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PCP4P48539 ISM2-202ENST00000342219 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PCP4P48539 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PCP4P48539 AC008677.1-201ENST00000519230 1561 ntBASIC10.8□□□□□ -0.68
PCP4P48539 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
PCP4P48539 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PCP4P48539 USP10-219ENST00000570191 2717 ntTSL 2 BASIC10.8□□□□□ -0.68
PCP4P48539 PAX5-201ENST00000358127 8615 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PCP4P48539 PLEKHG3-204ENST00000484731 3001 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
PCP4P48539 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
PCP4P48539 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
PCP4P48539 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PCP4P48539 AC152010.1-201ENST00000415779 2006 ntBASIC10.8□□□□□ -0.68
PCP4P48539 CSNK1G1-207ENST00000634654 2485 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
PCP4P48539 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
PCP4P48539 GRK7-201ENST00000264952 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PCP4P48539 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
PCP4P48539 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC10.8□□□□□ -0.68
PCP4P48539 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
PCP4P48539 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC10.8□□□□□ -0.68
PCP4P48539 RHOH-221ENST00000615577 2227 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
PCP4P48539 RHOH-223ENST00000619474 2230 ntAPPRIS P1 TSL 4 BASIC10.8□□□□□ -0.68
PCP4P48539 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
PCP4P48539 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
PCP4P48539 LGALS9-203ENST00000395473 3114 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
PCP4P48539 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
PCP4P48539 NFATC1-202ENST00000318065 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
PCP4P48539 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
PCP4P48539 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
PCP4P48539 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
PCP4P48539 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
PCP4P48539 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
PCP4P48539 TMCO4-202ENST00000375127 2403 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PCP4P48539 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
PCP4P48539 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC10.79□□□□□ -0.68
PCP4P48539 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC10.79□□□□□ -0.68
PCP4P48539 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms