Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC18.05■□□□□ 0.48
TM4SF4P48230 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC18.05■□□□□ 0.48
TM4SF4P48230 AL133499.1-201ENST00000596207 608 ntBASIC18.05■□□□□ 0.48
TM4SF4P48230 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM4SF4P48230 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM4SF4P48230 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TM4SF4P48230 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TM4SF4P48230 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TM4SF4P48230 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TM4SF4P48230 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.04■□□□□ 0.48
TM4SF4P48230 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.04■□□□□ 0.48
TM4SF4P48230 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TM4SF4P48230 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TM4SF4P48230 AP001282.1-201ENST00000531301 1499 ntBASIC18.04■□□□□ 0.48
TM4SF4P48230 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC18.04■□□□□ 0.48
TM4SF4P48230 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC18.04■□□□□ 0.48
TM4SF4P48230 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TM4SF4P48230 LBH-202ENST00000401506 485 ntTSL 3 BASIC18.04■□□□□ 0.48
TM4SF4P48230 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.04■□□□□ 0.48
TM4SF4P48230 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TM4SF4P48230 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TM4SF4P48230 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TM4SF4P48230 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC18.04■□□□□ 0.48
TM4SF4P48230 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC18.04■□□□□ 0.48
TM4SF4P48230 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC18.04■□□□□ 0.48
TM4SF4P48230 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC18.04■□□□□ 0.48
TM4SF4P48230 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC18.04■□□□□ 0.48
TM4SF4P48230 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC18.04■□□□□ 0.48
TM4SF4P48230 MIR4750-201ENST00000584564 56 ntBASIC18.04■□□□□ 0.48
TM4SF4P48230 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.04■□□□□ 0.48
TM4SF4P48230 AP003419.4-201ENST00000616071 517 ntBASIC18.04■□□□□ 0.48
TM4SF4P48230 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TM4SF4P48230 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TM4SF4P48230 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TM4SF4P48230 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TM4SF4P48230 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TM4SF4P48230 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.04■□□□□ 0.48
TM4SF4P48230 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.04■□□□□ 0.48
TM4SF4P48230 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TM4SF4P48230 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TM4SF4P48230 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TM4SF4P48230 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
TM4SF4P48230 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
TM4SF4P48230 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
TM4SF4P48230 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TM4SF4P48230 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.03■□□□□ 0.48
TM4SF4P48230 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TM4SF4P48230 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TM4SF4P48230 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TM4SF4P48230 AC006480.2-201ENST00000609770 1337 ntBASIC18.03■□□□□ 0.48
TM4SF4P48230 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.03■□□□□ 0.48
TM4SF4P48230 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC18.03■□□□□ 0.48
TM4SF4P48230 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.03■□□□□ 0.48
TM4SF4P48230 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TM4SF4P48230 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TM4SF4P48230 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TM4SF4P48230 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC18.03■□□□□ 0.48
TM4SF4P48230 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC18.03■□□□□ 0.48
TM4SF4P48230 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TM4SF4P48230 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC18.03■□□□□ 0.48
TM4SF4P48230 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC18.03■□□□□ 0.48
TM4SF4P48230 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC18.03■□□□□ 0.48
TM4SF4P48230 AC114812.1-204ENST00000449669 728 ntBASIC18.03■□□□□ 0.48
TM4SF4P48230 AC104784.1-201ENST00000473096 294 ntBASIC18.03■□□□□ 0.48
TM4SF4P48230 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.03■□□□□ 0.48
TM4SF4P48230 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC18.03■□□□□ 0.48
TM4SF4P48230 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC18.03■□□□□ 0.48
TM4SF4P48230 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC18.03■□□□□ 0.48
TM4SF4P48230 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.03■□□□□ 0.48
TM4SF4P48230 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TM4SF4P48230 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TM4SF4P48230 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TM4SF4P48230 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TM4SF4P48230 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TM4SF4P48230 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.02■□□□□ 0.48
TM4SF4P48230 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
TM4SF4P48230 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
TM4SF4P48230 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TM4SF4P48230 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
TM4SF4P48230 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TM4SF4P48230 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
TM4SF4P48230 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TM4SF4P48230 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC18.02■□□□□ 0.48
TM4SF4P48230 AL355334.1-201ENST00000417713 215 ntBASIC18.02■□□□□ 0.48
TM4SF4P48230 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC18.02■□□□□ 0.48
TM4SF4P48230 MSRA-203ENST00000441698 788 ntTSL 2 BASIC18.02■□□□□ 0.48
TM4SF4P48230 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TM4SF4P48230 RN7SL11P-201ENST00000471305 293 ntBASIC18.02■□□□□ 0.48
TM4SF4P48230 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TM4SF4P48230 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TM4SF4P48230 RNF41-210ENST00000552244 716 ntTSL 3 BASIC18.02■□□□□ 0.48
TM4SF4P48230 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC18.02■□□□□ 0.48
TM4SF4P48230 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
TM4SF4P48230 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TM4SF4P48230 AC087289.5-201ENST00000586076 3175 ntBASIC18.02■□□□□ 0.48
TM4SF4P48230 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TM4SF4P48230 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
TM4SF4P48230 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
TM4SF4P48230 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TM4SF4P48230 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms