Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.81■□□□□ 0.28
MMP13P45452 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.81■□□□□ 0.28
MMP13P45452 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MMP13P45452 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP13P45452 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.81■□□□□ 0.28
MMP13P45452 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP13P45452 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP13P45452 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MMP13P45452 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.81■□□□□ 0.28
MMP13P45452 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
MMP13P45452 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MMP13P45452 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP13P45452 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP13P45452 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP13P45452 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP13P45452 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP13P45452 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.8■□□□□ 0.28
MMP13P45452 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.8■□□□□ 0.28
MMP13P45452 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP13P45452 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.8■□□□□ 0.28
MMP13P45452 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.8■□□□□ 0.28
MMP13P45452 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.8■□□□□ 0.28
MMP13P45452 AL671277.1-201ENST00000429656 993 ntBASIC16.8■□□□□ 0.28
MMP13P45452 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.8■□□□□ 0.28
MMP13P45452 ACTG1P14-201ENST00000446382 1122 ntBASIC16.8■□□□□ 0.28
MMP13P45452 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.8■□□□□ 0.28
MMP13P45452 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
MMP13P45452 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.8■□□□□ 0.28
MMP13P45452 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP13P45452 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MMP13P45452 AC005829.1-201ENST00000570002 483 ntBASIC16.8■□□□□ 0.28
MMP13P45452 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.8■□□□□ 0.28
MMP13P45452 AC010327.4-202ENST00000591484 748 ntBASIC16.8■□□□□ 0.28
MMP13P45452 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.8■□□□□ 0.28
MMP13P45452 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
MMP13P45452 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.8■□□□□ 0.28
MMP13P45452 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MMP13P45452 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP13P45452 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.8■□□□□ 0.28
MMP13P45452 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP13P45452 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MMP13P45452 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.8■□□□□ 0.28
MMP13P45452 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.8■□□□□ 0.28
MMP13P45452 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
MMP13P45452 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
MMP13P45452 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MMP13P45452 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP13P45452 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP13P45452 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.79■□□□□ 0.28
MMP13P45452 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP13P45452 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.79■□□□□ 0.28
MMP13P45452 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
MMP13P45452 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MMP13P45452 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.79■□□□□ 0.28
MMP13P45452 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MMP13P45452 AC069224.1-201ENST00000566372 1715 ntBASIC16.79■□□□□ 0.28
MMP13P45452 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
MMP13P45452 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MMP13P45452 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MMP13P45452 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP13P45452 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP13P45452 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.79■□□□□ 0.28
MMP13P45452 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MMP13P45452 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.79■□□□□ 0.28
MMP13P45452 PRAL-201ENST00000624952 3286 ntBASIC16.79■□□□□ 0.28
MMP13P45452 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.79■□□□□ 0.28
MMP13P45452 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.79■□□□□ 0.28
MMP13P45452 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.79■□□□□ 0.28
MMP13P45452 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MMP13P45452 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.79■□□□□ 0.28
MMP13P45452 FAM86C2P-203ENST00000528684 1004 ntBASIC16.79■□□□□ 0.28
MMP13P45452 AC092865.5-201ENST00000545435 363 ntBASIC16.79■□□□□ 0.28
MMP13P45452 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MMP13P45452 MIR3687-2-201ENST00000577708 61 ntBASIC16.79■□□□□ 0.28
MMP13P45452 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.79■□□□□ 0.28
MMP13P45452 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP13P45452 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP13P45452 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
MMP13P45452 MIR3687-1-201ENST00000614492 61 ntBASIC16.79■□□□□ 0.28
MMP13P45452 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
MMP13P45452 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MMP13P45452 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.79■□□□□ 0.28
MMP13P45452 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP13P45452 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
MMP13P45452 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
MMP13P45452 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.79■□□□□ 0.28
MMP13P45452 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP13P45452 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.79■□□□□ 0.28
MMP13P45452 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.79■□□□□ 0.28
MMP13P45452 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP13P45452 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
MMP13P45452 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP13P45452 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP13P45452 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MMP13P45452 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP13P45452 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP13P45452 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MMP13P45452 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MMP13P45452 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
MMP13P45452 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms