Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC26.94■■□□□ 1.9
CFTRP13569 NAT9-222ENST00000583476 583 ntTSL 3 BASIC26.94■■□□□ 1.9
CFTRP13569 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC26.94■■□□□ 1.9
CFTRP13569 GPR39-203ENST00000622084 900 ntTSL 5 BASIC26.94■■□□□ 1.9
CFTRP13569 AC079336.7-201ENST00000623428 1078 ntBASIC26.94■■□□□ 1.9
CFTRP13569 CU633904.3-201ENST00000624042 1029 ntBASIC26.94■■□□□ 1.9
CFTRP13569 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CFTRP13569 RNF216P1-203ENST00000404404 2427 ntBASIC26.94■■□□□ 1.9
CFTRP13569 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CFTRP13569 AC139713.2-201ENST00000641328 2723 ntBASIC26.94■■□□□ 1.9
CFTRP13569 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CFTRP13569 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
CFTRP13569 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC26.94■■□□□ 1.9
CFTRP13569 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC26.94■■□□□ 1.9
CFTRP13569 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC26.94■■□□□ 1.9
CFTRP13569 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CFTRP13569 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC26.93■■□□□ 1.9
CFTRP13569 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CFTRP13569 HNRNPA1P63-201ENST00000427917 963 ntBASIC26.93■■□□□ 1.9
CFTRP13569 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC26.93■■□□□ 1.9
CFTRP13569 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC26.93■■□□□ 1.9
CFTRP13569 NCK2-206ENST00000522586 490 ntTSL 5 BASIC26.93■■□□□ 1.9
CFTRP13569 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC26.93■■□□□ 1.9
CFTRP13569 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CFTRP13569 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC26.93■■□□□ 1.9
CFTRP13569 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC26.93■■□□□ 1.9
CFTRP13569 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC26.93■■□□□ 1.9
CFTRP13569 AC073413.1-201ENST00000603927 732 ntBASIC26.93■■□□□ 1.9
CFTRP13569 AC007663.3-201ENST00000609632 465 ntBASIC26.93■■□□□ 1.9
CFTRP13569 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CFTRP13569 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CFTRP13569 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CFTRP13569 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC26.93■■□□□ 1.9
CFTRP13569 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC26.93■■□□□ 1.9
CFTRP13569 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC26.93■■□□□ 1.9
CFTRP13569 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CFTRP13569 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CFTRP13569 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CFTRP13569 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CFTRP13569 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CFTRP13569 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
CFTRP13569 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CFTRP13569 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC26.93■■□□□ 1.9
CFTRP13569 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CFTRP13569 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC26.93■■□□□ 1.9
CFTRP13569 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC26.93■■□□□ 1.9
CFTRP13569 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC26.93■■□□□ 1.9
CFTRP13569 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC26.93■■□□□ 1.9
CFTRP13569 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC26.93■■□□□ 1.9
CFTRP13569 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC26.93■■□□□ 1.9
CFTRP13569 DIO1-215ENST00000610607 796 ntTSL 5 BASIC26.93■■□□□ 1.9
CFTRP13569 AF254983.2-201ENST00000612331 135 ntBASIC26.93■■□□□ 1.9
CFTRP13569 AC244157.2-201ENST00000616239 1006 ntBASIC26.93■■□□□ 1.9
CFTRP13569 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
CFTRP13569 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CFTRP13569 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
CFTRP13569 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CFTRP13569 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CFTRP13569 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CFTRP13569 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CFTRP13569 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC26.92■■□□□ 1.9
CFTRP13569 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC26.92■■□□□ 1.9
CFTRP13569 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CFTRP13569 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
CFTRP13569 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CFTRP13569 MIR769-201ENST00000390225 118 ntBASIC26.92■■□□□ 1.9
CFTRP13569 ATP6V0CP2-201ENST00000469409 207 ntBASIC26.92■■□□□ 1.9
CFTRP13569 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
CFTRP13569 AC134698.3-201ENST00000523880 214 ntBASIC26.92■■□□□ 1.9
CFTRP13569 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC26.92■■□□□ 1.9
CFTRP13569 PRKXP1-201ENST00000561423 1122 ntBASIC26.92■■□□□ 1.9
CFTRP13569 MIR3907-201ENST00000579424 151 ntBASIC26.92■■□□□ 1.9
CFTRP13569 TUBBP5-203ENST00000508529 1334 ntBASIC26.92■■□□□ 1.9
CFTRP13569 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC26.92■■□□□ 1.9
CFTRP13569 AC008132.1-202ENST00000342005 1389 ntBASIC26.92■■□□□ 1.9
CFTRP13569 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CFTRP13569 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CFTRP13569 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC26.91■■□□□ 1.9
CFTRP13569 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
CFTRP13569 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CFTRP13569 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC26.91■■□□□ 1.9
CFTRP13569 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
CFTRP13569 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC26.91■■□□□ 1.9
CFTRP13569 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC26.91■■□□□ 1.9
CFTRP13569 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CFTRP13569 FTLP1-201ENST00000449155 526 ntBASIC26.91■■□□□ 1.9
CFTRP13569 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CFTRP13569 COX5BP1-201ENST00000507622 393 ntBASIC26.91■■□□□ 1.9
CFTRP13569 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC26.91■■□□□ 1.9
CFTRP13569 AC022748.3-201ENST00000621828 275 ntBASIC26.91■■□□□ 1.9
CFTRP13569 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC26.91■■□□□ 1.9
CFTRP13569 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CFTRP13569 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC26.91■■□□□ 1.9
CFTRP13569 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CFTRP13569 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CFTRP13569 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC26.9■■□□□ 1.9
CFTRP13569 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CFTRP13569 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
CFTRP13569 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CFTRP13569 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms