Protein–RNA interactions for Protein: P0CJ79

ZNF888, Zinc finger protein 888, humanhuman

Predicted RBP Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF888P0CJ79 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
ZNF888P0CJ79 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF888P0CJ79 AL691432.1-201ENST00000596308 1422 ntBASIC15.32■□□□□ 0.04
ZNF888P0CJ79 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
ZNF888P0CJ79 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF888P0CJ79 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
ZNF888P0CJ79 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
ZNF888P0CJ79 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF888P0CJ79 AC018695.7-201ENST00000624587 2492 ntBASIC15.32■□□□□ 0.04
ZNF888P0CJ79 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF888P0CJ79 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.32■□□□□ 0.04
ZNF888P0CJ79 CDC14C-201ENST00000428251 1719 ntBASIC15.31■□□□□ 0.04
ZNF888P0CJ79 AC069224.1-201ENST00000566372 1715 ntBASIC15.31■□□□□ 0.04
ZNF888P0CJ79 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 LINC02447-202ENST00000501888 2146 ntBASIC15.31■□□□□ 0.04
ZNF888P0CJ79 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 AC067863.1-201ENST00000494933 530 ntBASIC15.31■□□□□ 0.04
ZNF888P0CJ79 AC015911.4-201ENST00000588022 1070 ntBASIC15.31■□□□□ 0.04
ZNF888P0CJ79 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 AL035456.1-201ENST00000456064 1369 ntBASIC15.31■□□□□ 0.04
ZNF888P0CJ79 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 AP001282.1-201ENST00000531301 1499 ntBASIC15.31■□□□□ 0.04
ZNF888P0CJ79 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
ZNF888P0CJ79 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF888P0CJ79 AC010491.1-201ENST00000563101 2797 ntBASIC15.3■□□□□ 0.04
ZNF888P0CJ79 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF888P0CJ79 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF888P0CJ79 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF888P0CJ79 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF888P0CJ79 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ZNF888P0CJ79 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF888P0CJ79 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF888P0CJ79 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF888P0CJ79 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF888P0CJ79 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF888P0CJ79 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.3■□□□□ 0.04
ZNF888P0CJ79 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ZNF888P0CJ79 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.3■□□□□ 0.04
ZNF888P0CJ79 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ZNF888P0CJ79 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF888P0CJ79 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.3■□□□□ 0.04
ZNF888P0CJ79 AC107890.1-201ENST00000422478 521 ntBASIC15.3■□□□□ 0.04
ZNF888P0CJ79 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF888P0CJ79 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF888P0CJ79 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF888P0CJ79 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.3■□□□□ 0.04
ZNF888P0CJ79 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ZNF888P0CJ79 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF888P0CJ79 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF888P0CJ79 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF888P0CJ79 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.3■□□□□ 0.04
ZNF888P0CJ79 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.3■□□□□ 0.04
ZNF888P0CJ79 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF888P0CJ79 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF888P0CJ79 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF888P0CJ79 AC051619.7-201ENST00000568314 623 ntBASIC15.3■□□□□ 0.04
ZNF888P0CJ79 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF888P0CJ79 CYP4F24P-201ENST00000586049 1580 ntBASIC15.3■□□□□ 0.04
ZNF888P0CJ79 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF888P0CJ79 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ZNF888P0CJ79 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF888P0CJ79 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF888P0CJ79 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF888P0CJ79 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms