Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.84■□□□□ 0.61
MYCNP04198 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
MYCNP04198 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MYCNP04198 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
MYCNP04198 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
MYCNP04198 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MYCNP04198 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.61
MYCNP04198 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MYCNP04198 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MYCNP04198 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.83■□□□□ 0.61
MYCNP04198 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
MYCNP04198 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.83■□□□□ 0.61
MYCNP04198 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.83■□□□□ 0.61
MYCNP04198 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MYCNP04198 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.83■□□□□ 0.61
MYCNP04198 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MYCNP04198 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MYCNP04198 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MYCNP04198 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MYCNP04198 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MYCNP04198 RPS3AP25-201ENST00000411660 793 ntBASIC18.83■□□□□ 0.6
MYCNP04198 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MYCNP04198 RPL5P28-201ENST00000418634 693 ntBASIC18.83■□□□□ 0.6
MYCNP04198 HCG4-201ENST00000418983 998 ntBASIC18.83■□□□□ 0.6
MYCNP04198 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.83■□□□□ 0.6
MYCNP04198 NME2P1-201ENST00000426182 414 ntBASIC18.83■□□□□ 0.6
MYCNP04198 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.83■□□□□ 0.6
MYCNP04198 AL158053.1-201ENST00000441503 453 ntBASIC18.83■□□□□ 0.6
MYCNP04198 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.83■□□□□ 0.6
MYCNP04198 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MYCNP04198 Y_RNA.717-201ENST00000517106 92 ntBASIC18.83■□□□□ 0.6
MYCNP04198 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.83■□□□□ 0.6
MYCNP04198 MTND4LP25-201ENST00000570218 163 ntBASIC18.83■□□□□ 0.6
MYCNP04198 AC004232.2-201ENST00000574245 821 ntBASIC18.83■□□□□ 0.6
MYCNP04198 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.83■□□□□ 0.6
MYCNP04198 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC18.83■□□□□ 0.6
MYCNP04198 AL392048.1-201ENST00000613946 534 ntBASIC18.83■□□□□ 0.6
MYCNP04198 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC18.83■□□□□ 0.6
MYCNP04198 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC18.83■□□□□ 0.6
MYCNP04198 AC093648.1-201ENST00000623546 606 ntBASIC18.83■□□□□ 0.6
MYCNP04198 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.83■□□□□ 0.6
MYCNP04198 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
MYCNP04198 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MYCNP04198 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MYCNP04198 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MYCNP04198 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.83■□□□□ 0.6
MYCNP04198 AL138781.2-201ENST00000617896 1843 ntBASIC18.83■□□□□ 0.6
MYCNP04198 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
MYCNP04198 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MYCNP04198 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
MYCNP04198 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
MYCNP04198 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.83■□□□□ 0.6
MYCNP04198 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.83■□□□□ 0.6
MYCNP04198 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MYCNP04198 FLJ16779-201ENST00000612722 7638 ntBASIC18.82■□□□□ 0.6
MYCNP04198 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MYCNP04198 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
MYCNP04198 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MYCNP04198 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MYCNP04198 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MYCNP04198 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.82■□□□□ 0.6
MYCNP04198 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.82■□□□□ 0.6
MYCNP04198 TGIF1-203ENST00000345133 1088 ntTSL 3 BASIC18.82■□□□□ 0.6
MYCNP04198 WNT16-202ENST00000361301 1230 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MYCNP04198 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MYCNP04198 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
MYCNP04198 AC006460.1-201ENST00000421437 808 ntTSL 5 BASIC18.82■□□□□ 0.6
MYCNP04198 LAMTOR5-AS1-202ENST00000457535 817 ntTSL 3 BASIC18.82■□□□□ 0.6
MYCNP04198 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MYCNP04198 AC106806.2-201ENST00000509365 500 ntBASIC18.82■□□□□ 0.6
MYCNP04198 AC005351.1-201ENST00000511152 786 ntBASIC18.82■□□□□ 0.6
MYCNP04198 MTCO3P28-201ENST00000513351 515 ntBASIC18.82■□□□□ 0.6
MYCNP04198 ZNF971P-201ENST00000562068 1249 ntBASIC18.82■□□□□ 0.6
MYCNP04198 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC18.82■□□□□ 0.6
MYCNP04198 AC005726.6-201ENST00000579019 1083 ntTSL 3 BASIC18.82■□□□□ 0.6
MYCNP04198 AP001094.1-201ENST00000579805 193 ntBASIC18.82■□□□□ 0.6
MYCNP04198 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MYCNP04198 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.82■□□□□ 0.6
MYCNP04198 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MYCNP04198 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MYCNP04198 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MYCNP04198 SLC22A20-204ENST00000530038 1673 ntBASIC18.82■□□□□ 0.6
MYCNP04198 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MYCNP04198 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
MYCNP04198 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.82■□□□□ 0.6
MYCNP04198 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.82■□□□□ 0.6
MYCNP04198 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
MYCNP04198 LINC00304-203ENST00000565008 1864 ntBASIC18.82■□□□□ 0.6
MYCNP04198 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
MYCNP04198 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MYCNP04198 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MYCNP04198 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MYCNP04198 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.81■□□□□ 0.6
MYCNP04198 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MYCNP04198 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
MYCNP04198 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.81■□□□□ 0.6
MYCNP04198 GPR15-201ENST00000284311 1252 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
MYCNP04198 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.81■□□□□ 0.6
MYCNP04198 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MYCNP04198 MIR620-201ENST00000385232 95 ntBASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms