Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.02■□□□□ 0.32
RTN3O95197 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.02■□□□□ 0.32
RTN3O95197 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTN3O95197 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.02■□□□□ 0.32
RTN3O95197 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RTN3O95197 AC245100.5-201ENST00000452108 331 ntBASIC17.02■□□□□ 0.32
RTN3O95197 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.02■□□□□ 0.32
RTN3O95197 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RTN3O95197 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.02■□□□□ 0.32
RTN3O95197 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.02■□□□□ 0.32
RTN3O95197 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTN3O95197 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.02■□□□□ 0.32
RTN3O95197 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.02■□□□□ 0.32
RTN3O95197 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.02■□□□□ 0.32
RTN3O95197 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.02■□□□□ 0.32
RTN3O95197 TEX28P1-201ENST00000613479 1221 ntBASIC17.02■□□□□ 0.32
RTN3O95197 TEX28P2-201ENST00000617764 1221 ntBASIC17.02■□□□□ 0.32
RTN3O95197 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RTN3O95197 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RTN3O95197 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.02■□□□□ 0.32
RTN3O95197 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.02■□□□□ 0.32
RTN3O95197 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.02■□□□□ 0.31
RTN3O95197 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RTN3O95197 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RTN3O95197 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RTN3O95197 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RTN3O95197 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RTN3O95197 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RTN3O95197 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RTN3O95197 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RTN3O95197 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.02■□□□□ 0.31
RTN3O95197 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
RTN3O95197 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.02■□□□□ 0.31
RTN3O95197 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.02■□□□□ 0.31
RTN3O95197 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.02■□□□□ 0.31
RTN3O95197 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RTN3O95197 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RTN3O95197 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTN3O95197 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTN3O95197 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RTN3O95197 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.01■□□□□ 0.31
RTN3O95197 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
RTN3O95197 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTN3O95197 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTN3O95197 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.01■□□□□ 0.31
RTN3O95197 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTN3O95197 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTN3O95197 RPL37AP1-201ENST00000412502 279 ntBASIC17.01■□□□□ 0.31
RTN3O95197 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.01■□□□□ 0.31
RTN3O95197 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.01■□□□□ 0.31
RTN3O95197 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RTN3O95197 AC004890.2-204ENST00000481968 304 ntBASIC17.01■□□□□ 0.31
RTN3O95197 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.01■□□□□ 0.31
RTN3O95197 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RTN3O95197 MIR4745-201ENST00000577608 62 ntBASIC17.01■□□□□ 0.31
RTN3O95197 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
RTN3O95197 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.01■□□□□ 0.31
RTN3O95197 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.01■□□□□ 0.31
RTN3O95197 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTN3O95197 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RTN3O95197 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RTN3O95197 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTN3O95197 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTN3O95197 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RTN3O95197 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTN3O95197 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.01■□□□□ 0.31
RTN3O95197 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
RTN3O95197 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RTN3O95197 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RTN3O95197 AC087499.5-201ENST00000452760 1342 ntBASIC17■□□□□ 0.31
RTN3O95197 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
RTN3O95197 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTN3O95197 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17■□□□□ 0.31
RTN3O95197 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC17■□□□□ 0.31
RTN3O95197 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTN3O95197 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RTN3O95197 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
RTN3O95197 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RTN3O95197 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RTN3O95197 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTN3O95197 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RTN3O95197 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17■□□□□ 0.31
RTN3O95197 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTN3O95197 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RTN3O95197 AL080243.2-201ENST00000418783 582 ntBASIC17■□□□□ 0.31
RTN3O95197 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17■□□□□ 0.31
RTN3O95197 TSSK5P-201ENST00000423978 907 ntBASIC17■□□□□ 0.31
RTN3O95197 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17■□□□□ 0.31
RTN3O95197 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17■□□□□ 0.31
RTN3O95197 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17■□□□□ 0.31
RTN3O95197 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17■□□□□ 0.31
RTN3O95197 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
RTN3O95197 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17■□□□□ 0.31
RTN3O95197 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTN3O95197 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17■□□□□ 0.31
RTN3O95197 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTN3O95197 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17■□□□□ 0.31
RTN3O95197 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTN3O95197 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTN3O95197 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms