Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.16■□□□□ 0.02
HCN1O60741 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.16■□□□□ 0.02
HCN1O60741 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.16■□□□□ 0.02
HCN1O60741 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.16■□□□□ 0.02
HCN1O60741 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.16■□□□□ 0.02
HCN1O60741 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
HCN1O60741 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.16■□□□□ 0.02
HCN1O60741 MIR4492-201ENST00000581627 80 ntBASIC15.16■□□□□ 0.02
HCN1O60741 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.16■□□□□ 0.02
HCN1O60741 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.16■□□□□ 0.02
HCN1O60741 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCN1O60741 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.16■□□□□ 0.02
HCN1O60741 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.16■□□□□ 0.02
HCN1O60741 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCN1O60741 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCN1O60741 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCN1O60741 AC007326.2-201ENST00000624224 7579 ntBASIC15.16■□□□□ 0.02
HCN1O60741 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCN1O60741 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HCN1O60741 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HCN1O60741 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.16■□□□□ 0.02
HCN1O60741 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HCN1O60741 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.16■□□□□ 0.02
HCN1O60741 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCN1O60741 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.16■□□□□ 0.02
HCN1O60741 KRT8P39-201ENST00000396270 1433 ntBASIC15.16■□□□□ 0.02
HCN1O60741 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCN1O60741 SNX33P1-201ENST00000592116 1762 ntBASIC15.16■□□□□ 0.02
HCN1O60741 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HCN1O60741 SLC22A20-204ENST00000530038 1673 ntBASIC15.16■□□□□ 0.02
HCN1O60741 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCN1O60741 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HCN1O60741 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
HCN1O60741 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.15■□□□□ 0.02
HCN1O60741 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HCN1O60741 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HCN1O60741 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.15■□□□□ 0.02
HCN1O60741 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HCN1O60741 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HCN1O60741 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.15■□□□□ 0.02
HCN1O60741 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HCN1O60741 AL671710.1-201ENST00000610245 2349 ntBASIC15.15■□□□□ 0.02
HCN1O60741 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HCN1O60741 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
HCN1O60741 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HCN1O60741 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HCN1O60741 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HCN1O60741 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.15■□□□□ 0.02
HCN1O60741 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HCN1O60741 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HCN1O60741 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HCN1O60741 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
HCN1O60741 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
HCN1O60741 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
HCN1O60741 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HCN1O60741 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
HCN1O60741 RNU1-129P-201ENST00000384064 167 ntBASIC15.15■□□□□ 0.02
HCN1O60741 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
HCN1O60741 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HCN1O60741 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.15■□□□□ 0.02
HCN1O60741 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.15■□□□□ 0.02
HCN1O60741 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.15■□□□□ 0.02
HCN1O60741 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.15■□□□□ 0.02
HCN1O60741 HLA-J-203ENST00000494367 1087 ntBASIC15.15■□□□□ 0.02
HCN1O60741 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
HCN1O60741 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
HCN1O60741 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.15■□□□□ 0.02
HCN1O60741 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.15■□□□□ 0.02
HCN1O60741 AL135744.1-201ENST00000565098 629 ntBASIC15.15■□□□□ 0.02
HCN1O60741 U1.21-201ENST00000580816 167 ntBASIC15.15■□□□□ 0.02
HCN1O60741 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.15■□□□□ 0.02
HCN1O60741 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.15■□□□□ 0.02
HCN1O60741 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.15■□□□□ 0.02
HCN1O60741 AL355385.1-201ENST00000606123 409 ntBASIC15.15■□□□□ 0.02
HCN1O60741 AL031055.1-201ENST00000606362 631 ntBASIC15.15■□□□□ 0.02
HCN1O60741 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HCN1O60741 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.15■□□□□ 0.02
HCN1O60741 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.15■□□□□ 0.02
HCN1O60741 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HCN1O60741 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HCN1O60741 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
HCN1O60741 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HCN1O60741 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HCN1O60741 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HCN1O60741 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.15■□□□□ 0.02
HCN1O60741 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.15■□□□□ 0.02
HCN1O60741 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HCN1O60741 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HCN1O60741 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HCN1O60741 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.15■□□□□ 0.02
HCN1O60741 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.15■□□□□ 0.02
HCN1O60741 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HCN1O60741 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HCN1O60741 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.14■□□□□ 0.01
HCN1O60741 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HCN1O60741 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HCN1O60741 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
HCN1O60741 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
HCN1O60741 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
HCN1O60741 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms