Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CTNND1O60716 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.74■□□□□ 0.59
CTNND1O60716 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTNND1O60716 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTNND1O60716 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTNND1O60716 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTNND1O60716 BNIP3P1-202ENST00000550043 1585 ntBASIC18.73■□□□□ 0.59
CTNND1O60716 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.73■□□□□ 0.59
CTNND1O60716 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
CTNND1O60716 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.73■□□□□ 0.59
CTNND1O60716 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTNND1O60716 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.73■□□□□ 0.59
CTNND1O60716 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTNND1O60716 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.73■□□□□ 0.59
CTNND1O60716 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.73■□□□□ 0.59
CTNND1O60716 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.73■□□□□ 0.59
CTNND1O60716 KRT43P-201ENST00000434019 910 ntBASIC18.73■□□□□ 0.59
CTNND1O60716 AL162726.2-201ENST00000438986 1017 ntBASIC18.73■□□□□ 0.59
CTNND1O60716 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.73■□□□□ 0.59
CTNND1O60716 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.73■□□□□ 0.59
CTNND1O60716 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.73■□□□□ 0.59
CTNND1O60716 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.73■□□□□ 0.59
CTNND1O60716 AC233724.13-201ENST00000598383 410 ntBASIC18.73■□□□□ 0.59
CTNND1O60716 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.73■□□□□ 0.59
CTNND1O60716 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.73■□□□□ 0.59
CTNND1O60716 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CTNND1O60716 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.73■□□□□ 0.59
CTNND1O60716 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTNND1O60716 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTNND1O60716 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTNND1O60716 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTNND1O60716 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.73■□□□□ 0.59
CTNND1O60716 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.73■□□□□ 0.59
CTNND1O60716 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTNND1O60716 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTNND1O60716 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CTNND1O60716 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTNND1O60716 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTNND1O60716 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CTNND1O60716 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTNND1O60716 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CTNND1O60716 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.72■□□□□ 0.59
CTNND1O60716 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.72■□□□□ 0.59
CTNND1O60716 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
CTNND1O60716 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTNND1O60716 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CTNND1O60716 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTNND1O60716 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTNND1O60716 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.72■□□□□ 0.59
CTNND1O60716 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTNND1O60716 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.72■□□□□ 0.59
CTNND1O60716 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.72■□□□□ 0.59
CTNND1O60716 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CTNND1O60716 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CTNND1O60716 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.72■□□□□ 0.59
CTNND1O60716 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.72■□□□□ 0.59
CTNND1O60716 AC104989.1-201ENST00000519711 778 ntBASIC18.72■□□□□ 0.59
CTNND1O60716 SLC25A47P1-201ENST00000531577 414 ntBASIC18.72■□□□□ 0.59
CTNND1O60716 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.72■□□□□ 0.59
CTNND1O60716 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC18.72■□□□□ 0.59
CTNND1O60716 BRI3BPP1-201ENST00000594224 787 ntBASIC18.72■□□□□ 0.59
CTNND1O60716 PFAS-212ENST00000625942 396 ntTSL 5 BASIC18.72■□□□□ 0.59
CTNND1O60716 UBALD1-205ENST00000590891 2641 ntBASIC18.72■□□□□ 0.59
CTNND1O60716 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTNND1O60716 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTNND1O60716 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTNND1O60716 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CTNND1O60716 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.72■□□□□ 0.59
CTNND1O60716 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CTNND1O60716 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTNND1O60716 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTNND1O60716 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.72■□□□□ 0.59
CTNND1O60716 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CTNND1O60716 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTNND1O60716 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
CTNND1O60716 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CTNND1O60716 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTNND1O60716 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTNND1O60716 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CTNND1O60716 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTNND1O60716 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTNND1O60716 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CTNND1O60716 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTNND1O60716 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
CTNND1O60716 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTNND1O60716 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.71■□□□□ 0.59
CTNND1O60716 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CTNND1O60716 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.71■□□□□ 0.59
CTNND1O60716 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTNND1O60716 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CTNND1O60716 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTNND1O60716 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTNND1O60716 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTNND1O60716 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CTNND1O60716 TOMM22P5-201ENST00000416399 439 ntBASIC18.71■□□□□ 0.59
CTNND1O60716 ACTG1P3-201ENST00000431775 1114 ntBASIC18.71■□□□□ 0.59
CTNND1O60716 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.71■□□□□ 0.59
CTNND1O60716 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.71■□□□□ 0.59
CTNND1O60716 FAM86LP-201ENST00000478302 853 ntBASIC18.71■□□□□ 0.59
CTNND1O60716 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms