Protein–RNA interactions for Protein: O60291

MGRN1, E3 ubiquitin-protein ligase MGRN1, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MGRN1O60291 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
MGRN1O60291 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC15.77■□□□□ 0.11
MGRN1O60291 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
MGRN1O60291 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
MGRN1O60291 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MGRN1O60291 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
MGRN1O60291 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.77■□□□□ 0.11
MGRN1O60291 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15.77■□□□□ 0.11
MGRN1O60291 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
MGRN1O60291 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.76■□□□□ 0.11
MGRN1O60291 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MGRN1O60291 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
MGRN1O60291 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MGRN1O60291 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
MGRN1O60291 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MGRN1O60291 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.76■□□□□ 0.11
MGRN1O60291 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.76■□□□□ 0.11
MGRN1O60291 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.76■□□□□ 0.11
MGRN1O60291 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.76■□□□□ 0.11
MGRN1O60291 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC15.76■□□□□ 0.11
MGRN1O60291 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MGRN1O60291 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MGRN1O60291 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
MGRN1O60291 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MGRN1O60291 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MGRN1O60291 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.76■□□□□ 0.11
MGRN1O60291 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.76■□□□□ 0.11
MGRN1O60291 KRT8P26-201ENST00000534154 1276 ntBASIC15.76■□□□□ 0.11
MGRN1O60291 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.76■□□□□ 0.11
MGRN1O60291 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.76■□□□□ 0.11
MGRN1O60291 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
MGRN1O60291 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MGRN1O60291 AC068587.6-202ENST00000641839 5619 ntBASIC15.76■□□□□ 0.11
MGRN1O60291 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.76■□□□□ 0.11
MGRN1O60291 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.76■□□□□ 0.11
MGRN1O60291 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MGRN1O60291 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
MGRN1O60291 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MGRN1O60291 CICP8-201ENST00000455800 2813 ntBASIC15.76■□□□□ 0.11
MGRN1O60291 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
MGRN1O60291 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MGRN1O60291 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MGRN1O60291 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.75■□□□□ 0.11
MGRN1O60291 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.75■□□□□ 0.11
MGRN1O60291 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MGRN1O60291 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MGRN1O60291 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
MGRN1O60291 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MGRN1O60291 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MGRN1O60291 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.75■□□□□ 0.11
MGRN1O60291 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
MGRN1O60291 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MGRN1O60291 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
MGRN1O60291 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.75■□□□□ 0.11
MGRN1O60291 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.75■□□□□ 0.11
MGRN1O60291 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.75■□□□□ 0.11
MGRN1O60291 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.75■□□□□ 0.11
MGRN1O60291 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MGRN1O60291 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
MGRN1O60291 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MGRN1O60291 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MGRN1O60291 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
MGRN1O60291 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MGRN1O60291 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MGRN1O60291 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.75■□□□□ 0.11
MGRN1O60291 AC122714.2-201ENST00000502787 707 ntBASIC15.75■□□□□ 0.11
MGRN1O60291 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.75■□□□□ 0.11
MGRN1O60291 AC011498.5-201ENST00000592027 486 ntBASIC15.75■□□□□ 0.11
MGRN1O60291 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MGRN1O60291 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
MGRN1O60291 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MGRN1O60291 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
MGRN1O60291 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MGRN1O60291 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MGRN1O60291 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC15.75■□□□□ 0.11
MGRN1O60291 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MGRN1O60291 KRT8P39-201ENST00000396270 1433 ntBASIC15.75■□□□□ 0.11
MGRN1O60291 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MGRN1O60291 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.75■□□□□ 0.11
MGRN1O60291 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MGRN1O60291 AC132938.5-201ENST00000624980 1813 ntBASIC15.75■□□□□ 0.11
MGRN1O60291 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
MGRN1O60291 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.75■□□□□ 0.11
MGRN1O60291 GPAA1P2-202ENST00000606848 1787 ntBASIC15.75■□□□□ 0.11
MGRN1O60291 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
MGRN1O60291 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.74■□□□□ 0.11
MGRN1O60291 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
MGRN1O60291 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.74■□□□□ 0.11
MGRN1O60291 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MGRN1O60291 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MGRN1O60291 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.74■□□□□ 0.11
MGRN1O60291 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MGRN1O60291 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.74■□□□□ 0.11
MGRN1O60291 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
MGRN1O60291 SLC22A20-204ENST00000530038 1673 ntBASIC15.74■□□□□ 0.11
MGRN1O60291 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MGRN1O60291 COL6A4P2-202ENST00000504443 2753 ntBASIC15.74■□□□□ 0.11
MGRN1O60291 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MGRN1O60291 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MGRN1O60291 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms