Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 AC022532.1-201ENST00000624563 1728 ntBASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 AC092919.2-201ENST00000623631 1645 ntBASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 WASH6P-202ENST00000359512 1437 ntBASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 MIR574-201ENST00000385209 96 ntBASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 NMU-202ENST00000505262 693 ntTSL 3 BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 AP002472.1-201ENST00000577490 586 ntBASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 AC092865.6-201ENST00000642101 219 ntBASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 AC016027.1-202ENST00000607927 1699 ntBASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 POLD2P1-201ENST00000511220 997 ntBASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms