Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 AP001282.1-201ENST00000531301 1499 ntBASIC18.42■□□□□ 0.54
CLIC4Q9Y696 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 KRT8P48-201ENST00000515599 1220 ntBASIC18.42■□□□□ 0.54
CLIC4Q9Y696 PGAM5P1-201ENST00000518923 814 ntBASIC18.42■□□□□ 0.54
CLIC4Q9Y696 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 AC022532.1-201ENST00000624563 1728 ntBASIC18.42■□□□□ 0.54
CLIC4Q9Y696 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 AC103702.1-201ENST00000548801 2630 ntBASIC18.42■□□□□ 0.54
CLIC4Q9Y696 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 POLD2P1-201ENST00000511220 997 ntBASIC18.41■□□□□ 0.54
CLIC4Q9Y696 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 AC008267.7-201ENST00000624570 1194 ntBASIC18.41■□□□□ 0.54
CLIC4Q9Y696 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 AC020658.6-201ENST00000623564 1870 ntBASIC18.41■□□□□ 0.54
CLIC4Q9Y696 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLIC4Q9Y696 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CLIC4Q9Y696 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLIC4Q9Y696 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CLIC4Q9Y696 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLIC4Q9Y696 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.4■□□□□ 0.54
CLIC4Q9Y696 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CLIC4Q9Y696 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLIC4Q9Y696 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLIC4Q9Y696 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLIC4Q9Y696 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLIC4Q9Y696 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.4■□□□□ 0.54
CLIC4Q9Y696 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.4■□□□□ 0.54
CLIC4Q9Y696 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLIC4Q9Y696 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CLIC4Q9Y696 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms