Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.56■□□□□ 0.08
LRIT1Q9P2V4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.56■□□□□ 0.08
LRIT1Q9P2V4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
LRIT1Q9P2V4 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.56■□□□□ 0.08
LRIT1Q9P2V4 AC025048.3-201ENST00000590609 569 ntBASIC15.56■□□□□ 0.08
LRIT1Q9P2V4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRIT1Q9P2V4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRIT1Q9P2V4 AC005702.4-201ENST00000618393 416 ntBASIC15.56■□□□□ 0.08
LRIT1Q9P2V4 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRIT1Q9P2V4 AL691432.1-201ENST00000596308 1422 ntBASIC15.56■□□□□ 0.08
LRIT1Q9P2V4 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRIT1Q9P2V4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.56■□□□□ 0.08
LRIT1Q9P2V4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRIT1Q9P2V4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.56■□□□□ 0.08
LRIT1Q9P2V4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRIT1Q9P2V4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRIT1Q9P2V4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
LRIT1Q9P2V4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.56■□□□□ 0.08
LRIT1Q9P2V4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
LRIT1Q9P2V4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.56■□□□□ 0.08
LRIT1Q9P2V4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRIT1Q9P2V4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRIT1Q9P2V4 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRIT1Q9P2V4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 AC004987.2-201ENST00000395959 1148 ntBASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 MYCLP2-201ENST00000449268 967 ntBASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 INE1-201ENST00000456273 945 ntBASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 AC079328.2-201ENST00000561241 3354 ntBASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.55■□□□□ 0.08
LRIT1Q9P2V4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRIT1Q9P2V4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRIT1Q9P2V4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LRIT1Q9P2V4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRIT1Q9P2V4 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRIT1Q9P2V4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRIT1Q9P2V4 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.54■□□□□ 0.08
LRIT1Q9P2V4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRIT1Q9P2V4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.54■□□□□ 0.08
LRIT1Q9P2V4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
LRIT1Q9P2V4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
LRIT1Q9P2V4 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
LRIT1Q9P2V4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRIT1Q9P2V4 PCDHA14-201ENST00000506751 2298 ntBASIC15.54■□□□□ 0.08
LRIT1Q9P2V4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRIT1Q9P2V4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.54■□□□□ 0.08
LRIT1Q9P2V4 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRIT1Q9P2V4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.54■□□□□ 0.08
LRIT1Q9P2V4 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
LRIT1Q9P2V4 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.54■□□□□ 0.08
LRIT1Q9P2V4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.54■□□□□ 0.08
LRIT1Q9P2V4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRIT1Q9P2V4 GIMAP3P-201ENST00000495150 836 ntBASIC15.54■□□□□ 0.08
LRIT1Q9P2V4 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRIT1Q9P2V4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.54■□□□□ 0.08
LRIT1Q9P2V4 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.54■□□□□ 0.08
LRIT1Q9P2V4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.54■□□□□ 0.08
LRIT1Q9P2V4 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRIT1Q9P2V4 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.54■□□□□ 0.08
LRIT1Q9P2V4 AC243562.2-201ENST00000561247 970 ntBASIC15.54■□□□□ 0.08
LRIT1Q9P2V4 WASH4P-201ENST00000564273 1246 ntBASIC15.54■□□□□ 0.08
LRIT1Q9P2V4 AC092337.1-201ENST00000568699 1129 ntBASIC15.54■□□□□ 0.08
LRIT1Q9P2V4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.54■□□□□ 0.08
LRIT1Q9P2V4 AL008721.1-201ENST00000609964 604 ntBASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms