Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 AC125807.1-201ENST00000483097 614 ntBASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 AC067863.1-201ENST00000494933 530 ntBASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 AL079307.3-201ENST00000556114 283 ntBASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 REXO1L1P-202ENST00000608646 1974 ntBASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ECHDC1Q9NTX5 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ECHDC1Q9NTX5 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
ECHDC1Q9NTX5 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ECHDC1Q9NTX5 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
ECHDC1Q9NTX5 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ECHDC1Q9NTX5 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ECHDC1Q9NTX5 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
ECHDC1Q9NTX5 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ECHDC1Q9NTX5 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ECHDC1Q9NTX5 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ECHDC1Q9NTX5 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
ECHDC1Q9NTX5 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.6■□□□□ 0.73
ECHDC1Q9NTX5 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
ECHDC1Q9NTX5 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ECHDC1Q9NTX5 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ECHDC1Q9NTX5 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
ECHDC1Q9NTX5 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ECHDC1Q9NTX5 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.6■□□□□ 0.73
ECHDC1Q9NTX5 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.6■□□□□ 0.73
ECHDC1Q9NTX5 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ECHDC1Q9NTX5 FAM86GP-201ENST00000448322 971 ntBASIC19.6■□□□□ 0.73
ECHDC1Q9NTX5 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
ECHDC1Q9NTX5 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.6■□□□□ 0.73
ECHDC1Q9NTX5 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ECHDC1Q9NTX5 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ECHDC1Q9NTX5 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ECHDC1Q9NTX5 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC19.6■□□□□ 0.73
ECHDC1Q9NTX5 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ECHDC1Q9NTX5 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC19.6■□□□□ 0.73
ECHDC1Q9NTX5 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
ECHDC1Q9NTX5 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC19.6■□□□□ 0.73
ECHDC1Q9NTX5 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ECHDC1Q9NTX5 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ECHDC1Q9NTX5 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ECHDC1Q9NTX5 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.59■□□□□ 0.73
ECHDC1Q9NTX5 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ECHDC1Q9NTX5 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.59■□□□□ 0.73
ECHDC1Q9NTX5 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.59■□□□□ 0.73
ECHDC1Q9NTX5 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC19.59■□□□□ 0.73
ECHDC1Q9NTX5 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ECHDC1Q9NTX5 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ECHDC1Q9NTX5 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ECHDC1Q9NTX5 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.59■□□□□ 0.73
ECHDC1Q9NTX5 AC107890.1-201ENST00000422478 521 ntBASIC19.59■□□□□ 0.73
ECHDC1Q9NTX5 AL645939.2-201ENST00000427340 991 ntBASIC19.59■□□□□ 0.73
ECHDC1Q9NTX5 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ECHDC1Q9NTX5 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.59■□□□□ 0.73
ECHDC1Q9NTX5 AC140878.1-201ENST00000565277 250 ntBASIC19.59■□□□□ 0.73
ECHDC1Q9NTX5 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC19.59■□□□□ 0.73
ECHDC1Q9NTX5 AL589739.1-201ENST00000607720 493 ntBASIC19.59■□□□□ 0.73
ECHDC1Q9NTX5 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
ECHDC1Q9NTX5 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ECHDC1Q9NTX5 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
ECHDC1Q9NTX5 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ECHDC1Q9NTX5 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ECHDC1Q9NTX5 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ECHDC1Q9NTX5 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC19.59■□□□□ 0.73
ECHDC1Q9NTX5 CETN4P-206ENST00000642099 2168 ntBASIC19.59■□□□□ 0.73
ECHDC1Q9NTX5 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
ECHDC1Q9NTX5 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC19.58■□□□□ 0.73
ECHDC1Q9NTX5 KRT8P12-202ENST00000472924 1397 ntBASIC19.58■□□□□ 0.73
ECHDC1Q9NTX5 AC007950.2-201ENST00000615045 2347 ntBASIC19.58■□□□□ 0.73
ECHDC1Q9NTX5 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
ECHDC1Q9NTX5 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ECHDC1Q9NTX5 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
ECHDC1Q9NTX5 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
ECHDC1Q9NTX5 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ECHDC1Q9NTX5 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
ECHDC1Q9NTX5 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC19.58■□□□□ 0.73
ECHDC1Q9NTX5 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms