Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SALL1Q9NSC2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SALL1Q9NSC2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.32■□□□□ 0.68
SALL1Q9NSC2 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SALL1Q9NSC2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SALL1Q9NSC2 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC19.32■□□□□ 0.68
SALL1Q9NSC2 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SALL1Q9NSC2 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SALL1Q9NSC2 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SALL1Q9NSC2 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19.32■□□□□ 0.68
SALL1Q9NSC2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SALL1Q9NSC2 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SALL1Q9NSC2 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SALL1Q9NSC2 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SALL1Q9NSC2 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SALL1Q9NSC2 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SALL1Q9NSC2 GK-202ENST00000378941 458 ntTSL 3 BASIC19.31■□□□□ 0.68
SALL1Q9NSC2 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SALL1Q9NSC2 AC074338.1-201ENST00000416825 156 ntBASIC19.31■□□□□ 0.68
SALL1Q9NSC2 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
SALL1Q9NSC2 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
SALL1Q9NSC2 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC19.31■□□□□ 0.68
SALL1Q9NSC2 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC19.31■□□□□ 0.68
SALL1Q9NSC2 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC19.31■□□□□ 0.68
SALL1Q9NSC2 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC19.31■□□□□ 0.68
SALL1Q9NSC2 POLE2-203ENST00000553805 496 ntTSL 2 BASIC19.31■□□□□ 0.68
SALL1Q9NSC2 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SALL1Q9NSC2 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC19.31■□□□□ 0.68
SALL1Q9NSC2 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC19.31■□□□□ 0.68
SALL1Q9NSC2 LINC01115-203ENST00000606068 577 ntBASIC19.31■□□□□ 0.68
SALL1Q9NSC2 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SALL1Q9NSC2 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SALL1Q9NSC2 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SALL1Q9NSC2 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SALL1Q9NSC2 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SALL1Q9NSC2 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SALL1Q9NSC2 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
SALL1Q9NSC2 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SALL1Q9NSC2 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SALL1Q9NSC2 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SALL1Q9NSC2 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SALL1Q9NSC2 PCDHA1-201ENST00000378133 2726 ntBASIC19.31■□□□□ 0.68
SALL1Q9NSC2 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SALL1Q9NSC2 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SALL1Q9NSC2 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SALL1Q9NSC2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
SALL1Q9NSC2 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SALL1Q9NSC2 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SALL1Q9NSC2 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SALL1Q9NSC2 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SALL1Q9NSC2 DEK-201ENST00000244776 1441 ntTSL 2 BASIC19.3■□□□□ 0.68
SALL1Q9NSC2 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SALL1Q9NSC2 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.3■□□□□ 0.68
SALL1Q9NSC2 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SALL1Q9NSC2 HAUS4P1-201ENST00000406739 1145 ntBASIC19.3■□□□□ 0.68
SALL1Q9NSC2 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC19.3■□□□□ 0.68
SALL1Q9NSC2 KRT17P7-201ENST00000451704 1104 ntBASIC19.3■□□□□ 0.68
SALL1Q9NSC2 ELK1P1-201ENST00000485699 580 ntBASIC19.3■□□□□ 0.68
SALL1Q9NSC2 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC19.3■□□□□ 0.68
SALL1Q9NSC2 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SALL1Q9NSC2 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC19.3■□□□□ 0.68
SALL1Q9NSC2 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC19.3■□□□□ 0.68
SALL1Q9NSC2 TIMM17BP1-201ENST00000545713 516 ntBASIC19.3■□□□□ 0.68
SALL1Q9NSC2 AC123567.1-201ENST00000548294 1261 ntBASIC19.3■□□□□ 0.68
SALL1Q9NSC2 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC19.3■□□□□ 0.68
SALL1Q9NSC2 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC19.3■□□□□ 0.68
SALL1Q9NSC2 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC19.3■□□□□ 0.68
SALL1Q9NSC2 IGHV3-72-202ENST00000621503 303 ntBASIC19.3■□□□□ 0.68
SALL1Q9NSC2 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SALL1Q9NSC2 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SALL1Q9NSC2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SALL1Q9NSC2 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SALL1Q9NSC2 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SALL1Q9NSC2 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SALL1Q9NSC2 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SALL1Q9NSC2 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SALL1Q9NSC2 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.3■□□□□ 0.68
SALL1Q9NSC2 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SALL1Q9NSC2 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SALL1Q9NSC2 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.3■□□□□ 0.68
SALL1Q9NSC2 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SALL1Q9NSC2 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SALL1Q9NSC2 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SALL1Q9NSC2 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SALL1Q9NSC2 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SALL1Q9NSC2 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SALL1Q9NSC2 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SALL1Q9NSC2 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC19.29■□□□□ 0.68
SALL1Q9NSC2 AC098850.1-201ENST00000419919 790 ntBASIC19.29■□□□□ 0.68
SALL1Q9NSC2 FADS2-205ENST00000517839 469 ntTSL 3 BASIC19.29■□□□□ 0.68
SALL1Q9NSC2 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC19.29■□□□□ 0.68
SALL1Q9NSC2 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC19.29■□□□□ 0.68
SALL1Q9NSC2 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.29■□□□□ 0.68
SALL1Q9NSC2 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.29■□□□□ 0.68
SALL1Q9NSC2 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
SALL1Q9NSC2 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SALL1Q9NSC2 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SALL1Q9NSC2 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC19.29■□□□□ 0.68
SALL1Q9NSC2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SALL1Q9NSC2 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms