Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 FAM131B-202ENST00000409346 4295 ntAPPRIS P3 TSL 5 BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 ACE3P-201ENST00000423435 1973 ntBASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 WASF3-201ENST00000335327 4790 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 NAV2-204ENST00000396087 7882 ntTSL 5 BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 ZNF629-201ENST00000262525 6087 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 KRT8P8-201ENST00000434750 1448 ntBASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 AC022898.2-201ENST00000616822 1312 ntBASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 SAPCD2P1-201ENST00000395413 1184 ntBASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 HMGN1P19-201ENST00000436976 333 ntBASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 SMUG1P1-201ENST00000590640 811 ntBASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 BHLHE23-202ENST00000612929 1109 ntBASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 AC133552.2-201ENST00000619106 1032 ntBASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC8.15□□□□□ -1.1
CDC42SE1Q9NRR8 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC8.15□□□□□ -1.11
CDC42SE1Q9NRR8 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.11
CDC42SE1Q9NRR8 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC8.15□□□□□ -1.11
CDC42SE1Q9NRR8 BHMT2-201ENST00000255192 2050 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
CDC42SE1Q9NRR8 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
CDC42SE1Q9NRR8 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
CDC42SE1Q9NRR8 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
CDC42SE1Q9NRR8 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC8.15□□□□□ -1.11
CDC42SE1Q9NRR8 MEGF8-202ENST00000334370 10966 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
CDC42SE1Q9NRR8 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
CDC42SE1Q9NRR8 TP73-203ENST00000357733 4899 ntTSL 5 BASIC8.15□□□□□ -1.11
CDC42SE1Q9NRR8 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
CDC42SE1Q9NRR8 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
CDC42SE1Q9NRR8 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC8.15□□□□□ -1.11
CDC42SE1Q9NRR8 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC8.15□□□□□ -1.11
CDC42SE1Q9NRR8 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC8.15□□□□□ -1.11
CDC42SE1Q9NRR8 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.11
CDC42SE1Q9NRR8 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC8.15□□□□□ -1.11
CDC42SE1Q9NRR8 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC8.15□□□□□ -1.11
CDC42SE1Q9NRR8 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC8.15□□□□□ -1.11
CDC42SE1Q9NRR8 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
CDC42SE1Q9NRR8 AC092127.1-201ENST00000567093 3455 ntBASIC8.15□□□□□ -1.11
CDC42SE1Q9NRR8 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
CDC42SE1Q9NRR8 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC8.15□□□□□ -1.11
CDC42SE1Q9NRR8 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
CDC42SE1Q9NRR8 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC8.15□□□□□ -1.11
CDC42SE1Q9NRR8 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 LOX-206ENST00000639739 1626 ntTSL 5 BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 ARPP21-213ENST00000428373 3150 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC8.14□□□□□ -1.11
CDC42SE1Q9NRR8 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms