Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KIAA1549Q9HCM3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.27□□□□□ -0.13
KIAA1549Q9HCM3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.27□□□□□ -0.13
KIAA1549Q9HCM3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
KIAA1549Q9HCM3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
KIAA1549Q9HCM3 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
KIAA1549Q9HCM3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.27□□□□□ -0.13
KIAA1549Q9HCM3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
KIAA1549Q9HCM3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 AC063926.2-201ENST00000623766 1308 ntBASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 AC022188.1-201ENST00000620960 1664 ntBASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
KIAA1549Q9HCM3 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 TMEM14DP-201ENST00000422205 345 ntBASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 PHKG1P2-201ENST00000457537 863 ntBASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 TP53TG3HP-202ENST00000569755 579 ntBASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 AL596087.1-201ENST00000400979 1969 ntBASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 AL365203.3-201ENST00000609742 2057 ntBASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms