Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.54■□□□□ 0.72
RPAP1Q9BWH6 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPAP1Q9BWH6 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPAP1Q9BWH6 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.54■□□□□ 0.72
RPAP1Q9BWH6 AC005622.1-201ENST00000636801 1703 ntBASIC19.54■□□□□ 0.72
RPAP1Q9BWH6 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPAP1Q9BWH6 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RPAP1Q9BWH6 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.54■□□□□ 0.72
RPAP1Q9BWH6 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RPAP1Q9BWH6 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPAP1Q9BWH6 CU639417.3-201ENST00000624240 1404 ntBASIC19.54■□□□□ 0.72
RPAP1Q9BWH6 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPAP1Q9BWH6 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RPAP1Q9BWH6 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC19.54■□□□□ 0.72
RPAP1Q9BWH6 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC19.54■□□□□ 0.72
RPAP1Q9BWH6 RNA5SP410-201ENST00000516285 106 ntBASIC19.54■□□□□ 0.72
RPAP1Q9BWH6 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.54■□□□□ 0.72
RPAP1Q9BWH6 AL365330.1-201ENST00000607459 531 ntBASIC19.54■□□□□ 0.72
RPAP1Q9BWH6 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC19.54■□□□□ 0.72
RPAP1Q9BWH6 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
RPAP1Q9BWH6 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.54■□□□□ 0.72
RPAP1Q9BWH6 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.54■□□□□ 0.72
RPAP1Q9BWH6 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPAP1Q9BWH6 BTBD7P1-201ENST00000447253 1453 ntBASIC19.53■□□□□ 0.72
RPAP1Q9BWH6 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPAP1Q9BWH6 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.53■□□□□ 0.72
RPAP1Q9BWH6 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.53■□□□□ 0.72
RPAP1Q9BWH6 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPAP1Q9BWH6 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RPAP1Q9BWH6 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPAP1Q9BWH6 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPAP1Q9BWH6 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.53■□□□□ 0.72
RPAP1Q9BWH6 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RPAP1Q9BWH6 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPAP1Q9BWH6 OR8S1-201ENST00000310194 1080 ntBASIC19.53■□□□□ 0.72
RPAP1Q9BWH6 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RPAP1Q9BWH6 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPAP1Q9BWH6 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPAP1Q9BWH6 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RPAP1Q9BWH6 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC19.53■□□□□ 0.72
RPAP1Q9BWH6 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC19.53■□□□□ 0.72
RPAP1Q9BWH6 MTND6P24-201ENST00000440466 518 ntBASIC19.53■□□□□ 0.72
RPAP1Q9BWH6 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.53■□□□□ 0.72
RPAP1Q9BWH6 AL079307.3-201ENST00000556114 283 ntBASIC19.53■□□□□ 0.72
RPAP1Q9BWH6 AC140912.1-201ENST00000577171 1054 ntBASIC19.53■□□□□ 0.72
RPAP1Q9BWH6 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.53■□□□□ 0.72
RPAP1Q9BWH6 AC024267.1-201ENST00000582320 895 ntBASIC19.53■□□□□ 0.72
RPAP1Q9BWH6 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC19.53■□□□□ 0.72
RPAP1Q9BWH6 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.53■□□□□ 0.72
RPAP1Q9BWH6 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.53■□□□□ 0.72
RPAP1Q9BWH6 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RPAP1Q9BWH6 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
RPAP1Q9BWH6 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPAP1Q9BWH6 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPAP1Q9BWH6 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPAP1Q9BWH6 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.53■□□□□ 0.72
RPAP1Q9BWH6 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.53■□□□□ 0.72
RPAP1Q9BWH6 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.52■□□□□ 0.72
RPAP1Q9BWH6 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPAP1Q9BWH6 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPAP1Q9BWH6 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPAP1Q9BWH6 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.52■□□□□ 0.72
RPAP1Q9BWH6 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC19.52■□□□□ 0.72
RPAP1Q9BWH6 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPAP1Q9BWH6 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPAP1Q9BWH6 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.52■□□□□ 0.72
RPAP1Q9BWH6 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPAP1Q9BWH6 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPAP1Q9BWH6 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RPAP1Q9BWH6 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC19.52■□□□□ 0.72
RPAP1Q9BWH6 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC19.52■□□□□ 0.72
RPAP1Q9BWH6 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC19.52■□□□□ 0.72
RPAP1Q9BWH6 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.52■□□□□ 0.72
RPAP1Q9BWH6 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.52■□□□□ 0.72
RPAP1Q9BWH6 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPAP1Q9BWH6 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
RPAP1Q9BWH6 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.52■□□□□ 0.71
RPAP1Q9BWH6 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
RPAP1Q9BWH6 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPAP1Q9BWH6 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
RPAP1Q9BWH6 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RPAP1Q9BWH6 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC19.51■□□□□ 0.71
RPAP1Q9BWH6 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPAP1Q9BWH6 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPAP1Q9BWH6 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC19.51■□□□□ 0.71
RPAP1Q9BWH6 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPAP1Q9BWH6 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC19.51■□□□□ 0.71
RPAP1Q9BWH6 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC19.51■□□□□ 0.71
RPAP1Q9BWH6 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC19.51■□□□□ 0.71
RPAP1Q9BWH6 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC19.51■□□□□ 0.71
RPAP1Q9BWH6 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC19.51■□□□□ 0.71
RPAP1Q9BWH6 CDK4-206ENST00000549606 558 ntTSL 2 BASIC19.51■□□□□ 0.71
RPAP1Q9BWH6 TP53TG3HP-202ENST00000569755 579 ntBASIC19.51■□□□□ 0.71
RPAP1Q9BWH6 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC19.51■□□□□ 0.71
RPAP1Q9BWH6 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.51■□□□□ 0.71
RPAP1Q9BWH6 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.51■□□□□ 0.71
RPAP1Q9BWH6 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.51■□□□□ 0.71
RPAP1Q9BWH6 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.51■□□□□ 0.71
RPAP1Q9BWH6 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
RPAP1Q9BWH6 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms