Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL13Q99616 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL13Q99616 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.55□□□□□ -0.24
CCL13Q99616 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL13Q99616 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCL13Q99616 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.55□□□□□ -0.24
CCL13Q99616 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
CCL13Q99616 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL13Q99616 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.54□□□□□ -0.24
CCL13Q99616 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.54□□□□□ -0.24
CCL13Q99616 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL13Q99616 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
CCL13Q99616 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCL13Q99616 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCL13Q99616 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL13Q99616 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL13Q99616 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL13Q99616 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CCL13Q99616 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL13Q99616 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.54□□□□□ -0.24
CCL13Q99616 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CCL13Q99616 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.54□□□□□ -0.24
CCL13Q99616 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL13Q99616 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL13Q99616 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
CCL13Q99616 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL13Q99616 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL13Q99616 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL13Q99616 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL13Q99616 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CCL13Q99616 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CCL13Q99616 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.54□□□□□ -0.24
CCL13Q99616 AC092183.1-201ENST00000469884 875 ntBASIC13.54□□□□□ -0.24
CCL13Q99616 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.54□□□□□ -0.24
CCL13Q99616 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.54□□□□□ -0.24
CCL13Q99616 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.54□□□□□ -0.24
CCL13Q99616 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL13Q99616 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL13Q99616 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCL13Q99616 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL13Q99616 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL13Q99616 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCL13Q99616 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL13Q99616 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL13Q99616 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL13Q99616 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCL13Q99616 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCL13Q99616 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.54□□□□□ -0.24
CCL13Q99616 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
CCL13Q99616 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CCL13Q99616 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CCL13Q99616 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL13Q99616 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.53□□□□□ -0.24
CCL13Q99616 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.53□□□□□ -0.24
CCL13Q99616 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.53□□□□□ -0.24
CCL13Q99616 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCL13Q99616 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
CCL13Q99616 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL13Q99616 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCL13Q99616 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCL13Q99616 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL13Q99616 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CCL13Q99616 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL13Q99616 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL13Q99616 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.53□□□□□ -0.24
CCL13Q99616 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.53□□□□□ -0.24
CCL13Q99616 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL13Q99616 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL13Q99616 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCL13Q99616 SPDYE7P-202ENST00000420373 878 ntBASIC13.53□□□□□ -0.24
CCL13Q99616 AL353705.2-201ENST00000428243 662 ntBASIC13.53□□□□□ -0.24
CCL13Q99616 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.53□□□□□ -0.24
CCL13Q99616 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.53□□□□□ -0.24
CCL13Q99616 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCL13Q99616 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.53□□□□□ -0.24
CCL13Q99616 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
CCL13Q99616 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.53□□□□□ -0.24
CCL13Q99616 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.53□□□□□ -0.24
CCL13Q99616 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.53□□□□□ -0.24
CCL13Q99616 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.53□□□□□ -0.24
CCL13Q99616 MIR4453-201ENST00000584019 89 ntBASIC13.53□□□□□ -0.24
CCL13Q99616 Z92544.3-201ENST00000624747 417 ntBASIC13.53□□□□□ -0.24
CCL13Q99616 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL13Q99616 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL13Q99616 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL13Q99616 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CCL13Q99616 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL13Q99616 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCL13Q99616 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.53□□□□□ -0.24
CCL13Q99616 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCL13Q99616 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCL13Q99616 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CCL13Q99616 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL13Q99616 AC008677.1-201ENST00000519230 1561 ntBASIC13.53□□□□□ -0.24
CCL13Q99616 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL13Q99616 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
CCL13Q99616 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL13Q99616 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.53□□□□□ -0.24
CCL13Q99616 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CCL13Q99616 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms