Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.28□□□□□ -0.12
RAB40AQ8WXH6 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.28□□□□□ -0.12
RAB40AQ8WXH6 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB40AQ8WXH6 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RAB40AQ8WXH6 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
RAB40AQ8WXH6 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.28□□□□□ -0.12
RAB40AQ8WXH6 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.28□□□□□ -0.12
RAB40AQ8WXH6 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.28□□□□□ -0.12
RAB40AQ8WXH6 AC140113.2-201ENST00000604370 208 ntBASIC14.28□□□□□ -0.12
RAB40AQ8WXH6 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAB40AQ8WXH6 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RAB40AQ8WXH6 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
RAB40AQ8WXH6 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB40AQ8WXH6 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB40AQ8WXH6 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB40AQ8WXH6 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAB40AQ8WXH6 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
RAB40AQ8WXH6 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
RAB40AQ8WXH6 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.27□□□□□ -0.12
RAB40AQ8WXH6 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB40AQ8WXH6 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RAB40AQ8WXH6 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.27□□□□□ -0.12
RAB40AQ8WXH6 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB40AQ8WXH6 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB40AQ8WXH6 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB40AQ8WXH6 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RAB40AQ8WXH6 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB40AQ8WXH6 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB40AQ8WXH6 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.27□□□□□ -0.12
RAB40AQ8WXH6 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.27□□□□□ -0.12
RAB40AQ8WXH6 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
RAB40AQ8WXH6 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB40AQ8WXH6 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.27□□□□□ -0.13
RAB40AQ8WXH6 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB40AQ8WXH6 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.27□□□□□ -0.13
RAB40AQ8WXH6 KRT18P3-201ENST00000451602 1288 ntBASIC14.27□□□□□ -0.13
RAB40AQ8WXH6 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.27□□□□□ -0.13
RAB40AQ8WXH6 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.27□□□□□ -0.13
RAB40AQ8WXH6 MIR4492-201ENST00000581627 80 ntBASIC14.27□□□□□ -0.13
RAB40AQ8WXH6 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.27□□□□□ -0.13
RAB40AQ8WXH6 AC008667.4-201ENST00000607370 168 ntBASIC14.27□□□□□ -0.13
RAB40AQ8WXH6 AC010654.1-201ENST00000615722 808 ntBASIC14.27□□□□□ -0.13
RAB40AQ8WXH6 AC023511.2-201ENST00000618803 211 ntBASIC14.27□□□□□ -0.13
RAB40AQ8WXH6 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB40AQ8WXH6 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB40AQ8WXH6 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB40AQ8WXH6 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB40AQ8WXH6 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB40AQ8WXH6 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.27□□□□□ -0.13
RAB40AQ8WXH6 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB40AQ8WXH6 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
RAB40AQ8WXH6 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.27□□□□□ -0.13
RAB40AQ8WXH6 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB40AQ8WXH6 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB40AQ8WXH6 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB40AQ8WXH6 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB40AQ8WXH6 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB40AQ8WXH6 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RAB40AQ8WXH6 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB40AQ8WXH6 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RAB40AQ8WXH6 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB40AQ8WXH6 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.26□□□□□ -0.13
RAB40AQ8WXH6 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB40AQ8WXH6 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB40AQ8WXH6 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB40AQ8WXH6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB40AQ8WXH6 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.26□□□□□ -0.13
RAB40AQ8WXH6 RNA5SP416-201ENST00000516838 111 ntBASIC14.26□□□□□ -0.13
RAB40AQ8WXH6 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB40AQ8WXH6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.26□□□□□ -0.13
RAB40AQ8WXH6 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.26□□□□□ -0.13
RAB40AQ8WXH6 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB40AQ8WXH6 GGTLC5P-201ENST00000617623 998 ntBASIC14.26□□□□□ -0.13
RAB40AQ8WXH6 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.26□□□□□ -0.13
RAB40AQ8WXH6 AL805961.1-202ENST00000641562 540 ntBASIC14.26□□□□□ -0.13
RAB40AQ8WXH6 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB40AQ8WXH6 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB40AQ8WXH6 TMBIM7P-203ENST00000641617 1718 ntBASIC14.26□□□□□ -0.13
RAB40AQ8WXH6 SSR4P1-203ENST00000599569 2260 ntBASIC14.26□□□□□ -0.13
RAB40AQ8WXH6 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB40AQ8WXH6 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.26□□□□□ -0.13
RAB40AQ8WXH6 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB40AQ8WXH6 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB40AQ8WXH6 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB40AQ8WXH6 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB40AQ8WXH6 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms