Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 EEF1DP4-201ENST00000446006 880 ntBASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 AC004987.2-201ENST00000395959 1148 ntBASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 AC098850.1-201ENST00000419919 790 ntBASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 RN7SL752P-201ENST00000463779 287 ntBASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 GIMAP3P-201ENST00000495150 836 ntBASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 AC132938.2-201ENST00000579188 680 ntBASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 AL591163.1-201ENST00000641757 987 ntBASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 Z97205.2-201ENST00000564697 1639 ntBASIC18.09■□□□□ 0.49
CCDC62Q6P9F0 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.49
CCDC62Q6P9F0 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC62Q6P9F0 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC62Q6P9F0 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC62Q6P9F0 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.49
CCDC62Q6P9F0 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC62Q6P9F0 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
CCDC62Q6P9F0 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC62Q6P9F0 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC62Q6P9F0 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC62Q6P9F0 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.08■□□□□ 0.49
CCDC62Q6P9F0 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC62Q6P9F0 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CCDC62Q6P9F0 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC62Q6P9F0 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC62Q6P9F0 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC62Q6P9F0 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC62Q6P9F0 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC62Q6P9F0 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC62Q6P9F0 AL512384.1-201ENST00000406683 331 ntBASIC18.08■□□□□ 0.48
CCDC62Q6P9F0 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC62Q6P9F0 ARSEP1-201ENST00000420443 635 ntBASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms