Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 GPR53P-205ENST00000457298 1084 ntBASIC17.06■□□□□ 0.32
VARS2Q5ST30 IGHV3-71-201ENST00000523324 359 ntBASIC17.06■□□□□ 0.32
VARS2Q5ST30 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
VARS2Q5ST30 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
VARS2Q5ST30 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.06■□□□□ 0.32
VARS2Q5ST30 COA4-204ENST00000541455 1038 ntTSL 5 BASIC17.06■□□□□ 0.32
VARS2Q5ST30 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
VARS2Q5ST30 WASH4P-201ENST00000564273 1246 ntBASIC17.06■□□□□ 0.32
VARS2Q5ST30 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.06■□□□□ 0.32
VARS2Q5ST30 AC007386.2-202ENST00000622718 1018 ntTSL 3 BASIC17.06■□□□□ 0.32
VARS2Q5ST30 AC007431.3-201ENST00000623221 587 ntBASIC17.06■□□□□ 0.32
VARS2Q5ST30 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.06■□□□□ 0.32
VARS2Q5ST30 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.06■□□□□ 0.32
VARS2Q5ST30 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
VARS2Q5ST30 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
VARS2Q5ST30 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VARS2Q5ST30 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
VARS2Q5ST30 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VARS2Q5ST30 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.06■□□□□ 0.32
VARS2Q5ST30 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
VARS2Q5ST30 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
VARS2Q5ST30 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
VARS2Q5ST30 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
VARS2Q5ST30 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VARS2Q5ST30 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.06■□□□□ 0.32
VARS2Q5ST30 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VARS2Q5ST30 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
VARS2Q5ST30 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.06■□□□□ 0.32
VARS2Q5ST30 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.05■□□□□ 0.32
VARS2Q5ST30 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VARS2Q5ST30 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.05■□□□□ 0.32
VARS2Q5ST30 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VARS2Q5ST30 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VARS2Q5ST30 KRT8P37-201ENST00000451609 1420 ntBASIC17.05■□□□□ 0.32
VARS2Q5ST30 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
VARS2Q5ST30 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VARS2Q5ST30 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VARS2Q5ST30 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.05■□□□□ 0.32
VARS2Q5ST30 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.05■□□□□ 0.32
VARS2Q5ST30 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VARS2Q5ST30 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VARS2Q5ST30 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
VARS2Q5ST30 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.05■□□□□ 0.32
VARS2Q5ST30 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.05■□□□□ 0.32
VARS2Q5ST30 AC098614.1-201ENST00000368528 745 ntBASIC17.05■□□□□ 0.32
VARS2Q5ST30 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.05■□□□□ 0.32
VARS2Q5ST30 AZGP1P1-201ENST00000411909 902 ntBASIC17.05■□□□□ 0.32
VARS2Q5ST30 MEP1AP4-201ENST00000423244 1087 ntBASIC17.05■□□□□ 0.32
VARS2Q5ST30 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VARS2Q5ST30 ITGB5-AS1-201ENST00000495917 460 ntTSL 3 BASIC17.05■□□□□ 0.32
VARS2Q5ST30 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.05■□□□□ 0.32
VARS2Q5ST30 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.05■□□□□ 0.32
VARS2Q5ST30 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.05■□□□□ 0.32
VARS2Q5ST30 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.05■□□□□ 0.32
VARS2Q5ST30 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.05■□□□□ 0.32
VARS2Q5ST30 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.05■□□□□ 0.32
VARS2Q5ST30 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.05■□□□□ 0.32
VARS2Q5ST30 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VARS2Q5ST30 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.05■□□□□ 0.32
VARS2Q5ST30 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.05■□□□□ 0.32
VARS2Q5ST30 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VARS2Q5ST30 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VARS2Q5ST30 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VARS2Q5ST30 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VARS2Q5ST30 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VARS2Q5ST30 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
VARS2Q5ST30 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.05■□□□□ 0.32
VARS2Q5ST30 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
VARS2Q5ST30 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VARS2Q5ST30 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VARS2Q5ST30 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
VARS2Q5ST30 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VARS2Q5ST30 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VARS2Q5ST30 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VARS2Q5ST30 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VARS2Q5ST30 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VARS2Q5ST30 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VARS2Q5ST30 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VARS2Q5ST30 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
VARS2Q5ST30 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
VARS2Q5ST30 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
VARS2Q5ST30 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
VARS2Q5ST30 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
VARS2Q5ST30 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
VARS2Q5ST30 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
VARS2Q5ST30 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.04■□□□□ 0.32
VARS2Q5ST30 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
VARS2Q5ST30 BNIP3P1-202ENST00000550043 1585 ntBASIC17.04■□□□□ 0.32
VARS2Q5ST30 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VARS2Q5ST30 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.04■□□□□ 0.32
VARS2Q5ST30 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
VARS2Q5ST30 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VARS2Q5ST30 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VARS2Q5ST30 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.04■□□□□ 0.32
VARS2Q5ST30 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.04■□□□□ 0.32
VARS2Q5ST30 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC17.04■□□□□ 0.32
VARS2Q5ST30 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.04■□□□□ 0.32
VARS2Q5ST30 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.04■□□□□ 0.32
VARS2Q5ST30 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.04■□□□□ 0.32
VARS2Q5ST30 AC022148.2-201ENST00000586176 560 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms