Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.01■□□□□ 0.31
USP46P62068 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
USP46P62068 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
USP46P62068 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.01■□□□□ 0.31
USP46P62068 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP46P62068 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17■□□□□ 0.31
USP46P62068 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17■□□□□ 0.31
USP46P62068 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
USP46P62068 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17■□□□□ 0.31
USP46P62068 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
USP46P62068 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
USP46P62068 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
USP46P62068 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17■□□□□ 0.31
USP46P62068 AC087499.5-201ENST00000452760 1342 ntBASIC17■□□□□ 0.31
USP46P62068 LINC02199-201ENST00000506655 2702 ntBASIC17■□□□□ 0.31
USP46P62068 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17■□□□□ 0.31
USP46P62068 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
USP46P62068 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
USP46P62068 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17■□□□□ 0.31
USP46P62068 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
USP46P62068 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP46P62068 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP46P62068 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
USP46P62068 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP46P62068 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
USP46P62068 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17■□□□□ 0.31
USP46P62068 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17■□□□□ 0.31
USP46P62068 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17■□□□□ 0.31
USP46P62068 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17■□□□□ 0.31
USP46P62068 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17■□□□□ 0.31
USP46P62068 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17■□□□□ 0.31
USP46P62068 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17■□□□□ 0.31
USP46P62068 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17■□□□□ 0.31
USP46P62068 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17■□□□□ 0.31
USP46P62068 AL136982.4-201ENST00000437689 1740 ntBASIC17■□□□□ 0.31
USP46P62068 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17■□□□□ 0.31
USP46P62068 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
USP46P62068 SERBP1P5-201ENST00000510079 1181 ntBASIC17■□□□□ 0.31
USP46P62068 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17■□□□□ 0.31
USP46P62068 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP46P62068 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17■□□□□ 0.31
USP46P62068 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
USP46P62068 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17■□□□□ 0.31
USP46P62068 AC008738.7-201ENST00000609744 511 ntBASIC17■□□□□ 0.31
USP46P62068 AC008761.3-201ENST00000624803 892 ntBASIC17■□□□□ 0.31
USP46P62068 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP46P62068 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
USP46P62068 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP46P62068 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17■□□□□ 0.31
USP46P62068 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17■□□□□ 0.31
USP46P62068 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17■□□□□ 0.31
USP46P62068 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP46P62068 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP46P62068 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP46P62068 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.99■□□□□ 0.31
USP46P62068 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP46P62068 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP46P62068 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
USP46P62068 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
USP46P62068 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
USP46P62068 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP46P62068 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP46P62068 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.99■□□□□ 0.31
USP46P62068 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP46P62068 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
USP46P62068 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
USP46P62068 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.99■□□□□ 0.31
USP46P62068 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
USP46P62068 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.99■□□□□ 0.31
USP46P62068 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.99■□□□□ 0.31
USP46P62068 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP46P62068 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
USP46P62068 AL512361.1-201ENST00000554200 418 ntBASIC16.99■□□□□ 0.31
USP46P62068 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.99■□□□□ 0.31
USP46P62068 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.99■□□□□ 0.31
USP46P62068 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.99■□□□□ 0.31
USP46P62068 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
USP46P62068 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
USP46P62068 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.99■□□□□ 0.31
USP46P62068 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
USP46P62068 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.99■□□□□ 0.31
USP46P62068 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.99■□□□□ 0.31
USP46P62068 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
USP46P62068 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP46P62068 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP46P62068 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP46P62068 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
USP46P62068 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.98■□□□□ 0.31
USP46P62068 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP46P62068 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP46P62068 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.98■□□□□ 0.31
USP46P62068 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.98■□□□□ 0.31
USP46P62068 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
USP46P62068 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
USP46P62068 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP46P62068 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP46P62068 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
USP46P62068 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.98■□□□□ 0.31
USP46P62068 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
USP46P62068 FAM207CP-201ENST00000443486 507 ntBASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms