Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CKS1BP61024 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CKS1BP61024 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CKS1BP61024 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CKS1BP61024 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CKS1BP61024 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC11.42□□□□□ -0.58
CKS1BP61024 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CKS1BP61024 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
CKS1BP61024 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC11.42□□□□□ -0.58
CKS1BP61024 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CKS1BP61024 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC11.42□□□□□ -0.58
CKS1BP61024 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CKS1BP61024 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CKS1BP61024 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
CKS1BP61024 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
CKS1BP61024 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
CKS1BP61024 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CKS1BP61024 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CKS1BP61024 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CKS1BP61024 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC11.42□□□□□ -0.58
CKS1BP61024 RNF152P1-201ENST00000397754 604 ntBASIC11.42□□□□□ -0.58
CKS1BP61024 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
CKS1BP61024 AC087499.1-201ENST00000418141 1075 ntBASIC11.42□□□□□ -0.58
CKS1BP61024 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC11.42□□□□□ -0.58
CKS1BP61024 NKTR-203ENST00000442970 646 ntTSL 2 BASIC11.42□□□□□ -0.58
CKS1BP61024 AC112907.2-201ENST00000448639 330 ntBASIC11.42□□□□□ -0.58
CKS1BP61024 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC11.42□□□□□ -0.58
CKS1BP61024 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC11.42□□□□□ -0.58
CKS1BP61024 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC11.42□□□□□ -0.58
CKS1BP61024 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC11.42□□□□□ -0.58
CKS1BP61024 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC11.42□□□□□ -0.58
CKS1BP61024 STK25P1-201ENST00000585406 838 ntBASIC11.42□□□□□ -0.58
CKS1BP61024 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC11.42□□□□□ -0.58
CKS1BP61024 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CKS1BP61024 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
CKS1BP61024 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CKS1BP61024 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC11.42□□□□□ -0.58
CKS1BP61024 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
CKS1BP61024 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CKS1BP61024 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
CKS1BP61024 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CKS1BP61024 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CKS1BP61024 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CKS1BP61024 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC11.42□□□□□ -0.58
CKS1BP61024 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
CKS1BP61024 USP47-202ENST00000339865 7775 ntTSL 2 BASIC11.42□□□□□ -0.58
CKS1BP61024 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CKS1BP61024 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CKS1BP61024 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC11.42□□□□□ -0.58
CKS1BP61024 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CKS1BP61024 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC11.42□□□□□ -0.58
CKS1BP61024 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CKS1BP61024 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC11.42□□□□□ -0.58
CKS1BP61024 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
CKS1BP61024 AC041040.2-201ENST00000622926 2899 ntBASIC11.42□□□□□ -0.58
CKS1BP61024 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC11.41□□□□□ -0.58
CKS1BP61024 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
CKS1BP61024 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CKS1BP61024 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CKS1BP61024 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CKS1BP61024 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CKS1BP61024 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC11.41□□□□□ -0.58
CKS1BP61024 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CKS1BP61024 AC006486.2-201ENST00000624246 2199 ntBASIC11.41□□□□□ -0.58
CKS1BP61024 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CKS1BP61024 FUT8-AS1-201ENST00000621019 1521 ntBASIC11.41□□□□□ -0.58
CKS1BP61024 AC022532.1-201ENST00000624563 1728 ntBASIC11.41□□□□□ -0.58
CKS1BP61024 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC11.41□□□□□ -0.58
CKS1BP61024 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CKS1BP61024 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CKS1BP61024 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CKS1BP61024 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
CKS1BP61024 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CKS1BP61024 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
CKS1BP61024 AL135999.2-201ENST00000622438 1686 ntBASIC11.41□□□□□ -0.58
CKS1BP61024 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC11.41□□□□□ -0.58
CKS1BP61024 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC11.41□□□□□ -0.58
CKS1BP61024 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CKS1BP61024 AC003669.1-201ENST00000334569 611 ntBASIC11.41□□□□□ -0.58
CKS1BP61024 AC113347.1-201ENST00000413321 391 ntBASIC11.41□□□□□ -0.58
CKS1BP61024 TSPY5P-201ENST00000426936 936 ntBASIC11.41□□□□□ -0.58
CKS1BP61024 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CKS1BP61024 VENTXP7-201ENST00000475503 772 ntBASIC11.41□□□□□ -0.58
CKS1BP61024 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC11.41□□□□□ -0.58
CKS1BP61024 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC11.41□□□□□ -0.58
CKS1BP61024 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CKS1BP61024 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC11.41□□□□□ -0.58
CKS1BP61024 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CKS1BP61024 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC11.41□□□□□ -0.58
CKS1BP61024 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC11.41□□□□□ -0.58
CKS1BP61024 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CKS1BP61024 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
CKS1BP61024 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC11.41□□□□□ -0.58
CKS1BP61024 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC11.41□□□□□ -0.58
CKS1BP61024 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CKS1BP61024 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CKS1BP61024 ACE-203ENST00000413513 2237 ntTSL 2 BASIC11.41□□□□□ -0.58
CKS1BP61024 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CKS1BP61024 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CKS1BP61024 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms