Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.9■□□□□ 0.14
CLDN2P57739 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CLDN2P57739 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN2P57739 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN2P57739 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN2P57739 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN2P57739 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN2P57739 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN2P57739 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN2P57739 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.9■□□□□ 0.14
CLDN2P57739 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.9■□□□□ 0.14
CLDN2P57739 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CLDN2P57739 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.89■□□□□ 0.13
CLDN2P57739 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN2P57739 AL391825.1-201ENST00000457671 1364 ntBASIC15.89■□□□□ 0.13
CLDN2P57739 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN2P57739 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN2P57739 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CLDN2P57739 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN2P57739 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN2P57739 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.89■□□□□ 0.13
CLDN2P57739 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN2P57739 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN2P57739 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CLDN2P57739 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN2P57739 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN2P57739 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.89■□□□□ 0.13
CLDN2P57739 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.89■□□□□ 0.13
CLDN2P57739 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN2P57739 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN2P57739 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.89■□□□□ 0.13
CLDN2P57739 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CLDN2P57739 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN2P57739 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN2P57739 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.89■□□□□ 0.13
CLDN2P57739 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.89■□□□□ 0.13
CLDN2P57739 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.89■□□□□ 0.13
CLDN2P57739 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.89■□□□□ 0.13
CLDN2P57739 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.89■□□□□ 0.13
CLDN2P57739 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN2P57739 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN2P57739 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.89■□□□□ 0.13
CLDN2P57739 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.89■□□□□ 0.13
CLDN2P57739 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.89■□□□□ 0.13
CLDN2P57739 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.89■□□□□ 0.13
CLDN2P57739 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.89■□□□□ 0.13
CLDN2P57739 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.89■□□□□ 0.13
CLDN2P57739 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.89■□□□□ 0.13
CLDN2P57739 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN2P57739 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
CLDN2P57739 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN2P57739 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN2P57739 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN2P57739 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN2P57739 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CLDN2P57739 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN2P57739 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
CLDN2P57739 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN2P57739 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.89■□□□□ 0.13
CLDN2P57739 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.89■□□□□ 0.13
CLDN2P57739 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.89■□□□□ 0.13
CLDN2P57739 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.89■□□□□ 0.13
CLDN2P57739 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.89■□□□□ 0.13
CLDN2P57739 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.89■□□□□ 0.13
CLDN2P57739 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN2P57739 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN2P57739 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN2P57739 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN2P57739 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CLDN2P57739 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.88■□□□□ 0.13
CLDN2P57739 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN2P57739 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN2P57739 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN2P57739 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN2P57739 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CLDN2P57739 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN2P57739 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN2P57739 ME2P1-201ENST00000426028 1970 ntBASIC15.88■□□□□ 0.13
CLDN2P57739 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN2P57739 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.88■□□□□ 0.13
CLDN2P57739 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CLDN2P57739 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN2P57739 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN2P57739 FO393414.2-201ENST00000405153 598 ntBASIC15.88■□□□□ 0.13
CLDN2P57739 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CLDN2P57739 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.88■□□□□ 0.13
CLDN2P57739 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN2P57739 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.88■□□□□ 0.13
CLDN2P57739 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
CLDN2P57739 AC055876.2-201ENST00000531834 546 ntBASIC15.88■□□□□ 0.13
CLDN2P57739 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.88■□□□□ 0.13
CLDN2P57739 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.88■□□□□ 0.13
CLDN2P57739 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.88■□□□□ 0.13
CLDN2P57739 AC074044.1-201ENST00000609673 707 ntBASIC15.88■□□□□ 0.13
CLDN2P57739 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
CLDN2P57739 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN2P57739 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN2P57739 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.88■□□□□ 0.13
CLDN2P57739 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.88■□□□□ 0.13
CLDN2P57739 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms