Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 ALOX12P2-203ENST00000570921 1945 ntBASIC16.79■□□□□ 0.28
EPHB3P54753 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
EPHB3P54753 AZGP1P1-201ENST00000411909 902 ntBASIC16.79■□□□□ 0.28
EPHB3P54753 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.79■□□□□ 0.28
EPHB3P54753 GPR53P-205ENST00000457298 1084 ntBASIC16.79■□□□□ 0.28
EPHB3P54753 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.79■□□□□ 0.28
EPHB3P54753 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.79■□□□□ 0.28
EPHB3P54753 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
EPHB3P54753 RARRES2P5-201ENST00000564013 466 ntBASIC16.79■□□□□ 0.28
EPHB3P54753 AL008721.1-201ENST00000609964 604 ntBASIC16.79■□□□□ 0.28
EPHB3P54753 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
EPHB3P54753 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.79■□□□□ 0.28
EPHB3P54753 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHB3P54753 AC005052.1-201ENST00000625181 2492 ntBASIC16.79■□□□□ 0.28
EPHB3P54753 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
EPHB3P54753 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHB3P54753 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHB3P54753 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHB3P54753 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.79■□□□□ 0.28
EPHB3P54753 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.79■□□□□ 0.28
EPHB3P54753 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
EPHB3P54753 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHB3P54753 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.79■□□□□ 0.28
EPHB3P54753 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHB3P54753 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
EPHB3P54753 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
EPHB3P54753 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
EPHB3P54753 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EPHB3P54753 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.78■□□□□ 0.28
EPHB3P54753 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
EPHB3P54753 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
EPHB3P54753 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EPHB3P54753 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
EPHB3P54753 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EPHB3P54753 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
EPHB3P54753 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
EPHB3P54753 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EPHB3P54753 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
EPHB3P54753 BNIP3P1-202ENST00000550043 1585 ntBASIC16.78■□□□□ 0.28
EPHB3P54753 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
EPHB3P54753 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
EPHB3P54753 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
EPHB3P54753 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.78■□□□□ 0.28
EPHB3P54753 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
EPHB3P54753 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EPHB3P54753 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
EPHB3P54753 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.78■□□□□ 0.28
EPHB3P54753 ELK1P1-201ENST00000485699 580 ntBASIC16.78■□□□□ 0.28
EPHB3P54753 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.78■□□□□ 0.28
EPHB3P54753 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.78■□□□□ 0.28
EPHB3P54753 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.78■□□□□ 0.28
EPHB3P54753 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.78■□□□□ 0.28
EPHB3P54753 AC132938.2-201ENST00000579188 680 ntBASIC16.78■□□□□ 0.28
EPHB3P54753 AL359881.2-201ENST00000602973 570 ntBASIC16.78■□□□□ 0.28
EPHB3P54753 AL591163.1-201ENST00000641757 987 ntBASIC16.78■□□□□ 0.28
EPHB3P54753 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EPHB3P54753 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
EPHB3P54753 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EPHB3P54753 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.78■□□□□ 0.28
EPHB3P54753 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EPHB3P54753 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.78■□□□□ 0.28
EPHB3P54753 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.78■□□□□ 0.28
EPHB3P54753 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
EPHB3P54753 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
EPHB3P54753 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
EPHB3P54753 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EPHB3P54753 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
EPHB3P54753 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
EPHB3P54753 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
EPHB3P54753 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
EPHB3P54753 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EPHB3P54753 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
EPHB3P54753 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EPHB3P54753 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
EPHB3P54753 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.77■□□□□ 0.28
EPHB3P54753 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.77■□□□□ 0.28
EPHB3P54753 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EPHB3P54753 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EPHB3P54753 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
EPHB3P54753 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.77■□□□□ 0.28
EPHB3P54753 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.77■□□□□ 0.28
EPHB3P54753 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
EPHB3P54753 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.77■□□□□ 0.28
EPHB3P54753 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
EPHB3P54753 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.77■□□□□ 0.28
EPHB3P54753 CTBP2P3-201ENST00000585629 1255 ntBASIC16.77■□□□□ 0.28
EPHB3P54753 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.77■□□□□ 0.28
EPHB3P54753 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
EPHB3P54753 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
EPHB3P54753 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.77■□□□□ 0.28
EPHB3P54753 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.77■□□□□ 0.28
EPHB3P54753 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
EPHB3P54753 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
EPHB3P54753 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
EPHB3P54753 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EPHB3P54753 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
EPHB3P54753 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
EPHB3P54753 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
EPHB3P54753 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
EPHB3P54753 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms