Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.09□□□□□ -0.15
ATP1B3P54709 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.09□□□□□ -0.15
ATP1B3P54709 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.09□□□□□ -0.15
ATP1B3P54709 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.09□□□□□ -0.15
ATP1B3P54709 MIR648-201ENST00000385046 94 ntBASIC14.09□□□□□ -0.15
ATP1B3P54709 HMGA1P7-201ENST00000406908 502 ntBASIC14.09□□□□□ -0.15
ATP1B3P54709 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.09□□□□□ -0.15
ATP1B3P54709 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATP1B3P54709 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
ATP1B3P54709 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
ATP1B3P54709 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.09□□□□□ -0.15
ATP1B3P54709 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.09□□□□□ -0.15
ATP1B3P54709 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ATP1B3P54709 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ATP1B3P54709 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
ATP1B3P54709 AL691432.3-201ENST00000621860 400 ntBASIC14.09□□□□□ -0.15
ATP1B3P54709 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.09□□□□□ -0.15
ATP1B3P54709 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
ATP1B3P54709 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATP1B3P54709 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
ATP1B3P54709 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATP1B3P54709 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATP1B3P54709 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
ATP1B3P54709 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ATP1B3P54709 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATP1B3P54709 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.09□□□□□ -0.15
ATP1B3P54709 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ATP1B3P54709 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATP1B3P54709 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ATP1B3P54709 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.09□□□□□ -0.15
ATP1B3P54709 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATP1B3P54709 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATP1B3P54709 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATP1B3P54709 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATP1B3P54709 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATP1B3P54709 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
ATP1B3P54709 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.08□□□□□ -0.15
ATP1B3P54709 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ATP1B3P54709 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ATP1B3P54709 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
ATP1B3P54709 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
ATP1B3P54709 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
ATP1B3P54709 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
ATP1B3P54709 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
ATP1B3P54709 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
ATP1B3P54709 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATP1B3P54709 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.08□□□□□ -0.16
ATP1B3P54709 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATP1B3P54709 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATP1B3P54709 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
ATP1B3P54709 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.08□□□□□ -0.16
ATP1B3P54709 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATP1B3P54709 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.08□□□□□ -0.16
ATP1B3P54709 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ATP1B3P54709 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
ATP1B3P54709 AC022532.1-201ENST00000624563 1728 ntBASIC14.08□□□□□ -0.16
ATP1B3P54709 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATP1B3P54709 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATP1B3P54709 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
ATP1B3P54709 AC098831.1-202ENST00000438821 336 ntBASIC14.08□□□□□ -0.16
ATP1B3P54709 VN2R19P-201ENST00000442399 1052 ntBASIC14.08□□□□□ -0.16
ATP1B3P54709 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.08□□□□□ -0.16
ATP1B3P54709 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
ATP1B3P54709 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.08□□□□□ -0.16
ATP1B3P54709 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ATP1B3P54709 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
ATP1B3P54709 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.08□□□□□ -0.16
ATP1B3P54709 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.08□□□□□ -0.16
ATP1B3P54709 AL031008.1-201ENST00000619963 541 ntBASIC14.08□□□□□ -0.16
ATP1B3P54709 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.08□□□□□ -0.16
ATP1B3P54709 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.08□□□□□ -0.16
ATP1B3P54709 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATP1B3P54709 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
ATP1B3P54709 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ATP1B3P54709 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
ATP1B3P54709 AL592424.1-201ENST00000563624 1536 ntBASIC14.08□□□□□ -0.16
ATP1B3P54709 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATP1B3P54709 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.08□□□□□ -0.16
ATP1B3P54709 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATP1B3P54709 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATP1B3P54709 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATP1B3P54709 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATP1B3P54709 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATP1B3P54709 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ATP1B3P54709 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATP1B3P54709 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATP1B3P54709 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATP1B3P54709 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.08□□□□□ -0.16
ATP1B3P54709 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.08□□□□□ -0.16
ATP1B3P54709 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATP1B3P54709 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATP1B3P54709 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATP1B3P54709 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.07□□□□□ -0.16
ATP1B3P54709 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.07□□□□□ -0.16
ATP1B3P54709 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATP1B3P54709 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
ATP1B3P54709 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATP1B3P54709 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATP1B3P54709 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATP1B3P54709 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms