Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A2P43004 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A2P43004 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SLC1A2P43004 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.11■□□□□ 0.17
SLC1A2P43004 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A2P43004 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A2P43004 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC1A2P43004 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A2P43004 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A2P43004 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.11■□□□□ 0.17
SLC1A2P43004 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A2P43004 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A2P43004 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A2P43004 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.1■□□□□ 0.17
SLC1A2P43004 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC1A2P43004 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.1■□□□□ 0.17
SLC1A2P43004 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A2P43004 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC1A2P43004 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SLC1A2P43004 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A2P43004 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A2P43004 AL022342.1-201ENST00000400363 863 ntBASIC16.1■□□□□ 0.17
SLC1A2P43004 AC142381.1-201ENST00000426099 345 ntBASIC16.1■□□□□ 0.17
SLC1A2P43004 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.1■□□□□ 0.17
SLC1A2P43004 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.1■□□□□ 0.17
SLC1A2P43004 RN7SL589P-201ENST00000481268 310 ntBASIC16.1■□□□□ 0.17
SLC1A2P43004 PGAM5P1-201ENST00000518923 814 ntBASIC16.1■□□□□ 0.17
SLC1A2P43004 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC1A2P43004 KRT18P58-201ENST00000527480 1120 ntBASIC16.1■□□□□ 0.17
SLC1A2P43004 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.1■□□□□ 0.17
SLC1A2P43004 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.1■□□□□ 0.17
SLC1A2P43004 AC061975.2-201ENST00000581722 295 ntBASIC16.1■□□□□ 0.17
SLC1A2P43004 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC1A2P43004 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC1A2P43004 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A2P43004 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.1■□□□□ 0.17
SLC1A2P43004 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A2P43004 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A2P43004 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
SLC1A2P43004 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
SLC1A2P43004 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.1■□□□□ 0.17
SLC1A2P43004 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A2P43004 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SLC1A2P43004 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SLC1A2P43004 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A2P43004 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.1■□□□□ 0.17
SLC1A2P43004 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.1■□□□□ 0.17
SLC1A2P43004 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
SLC1A2P43004 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A2P43004 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC1A2P43004 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC1A2P43004 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A2P43004 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.1■□□□□ 0.17
SLC1A2P43004 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC1A2P43004 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A2P43004 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A2P43004 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC1A2P43004 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A2P43004 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
SLC1A2P43004 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC1A2P43004 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC1A2P43004 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC1A2P43004 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC1A2P43004 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC1A2P43004 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC1A2P43004 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
SLC1A2P43004 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
SLC1A2P43004 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC1A2P43004 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC1A2P43004 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC1A2P43004 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC1A2P43004 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC1A2P43004 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SLC1A2P43004 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC1A2P43004 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC1A2P43004 MIR574-201ENST00000385209 96 ntBASIC16.09■□□□□ 0.17
SLC1A2P43004 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC1A2P43004 YBX2P1-201ENST00000394192 760 ntBASIC16.09■□□□□ 0.17
SLC1A2P43004 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC1A2P43004 MCCD1P2-201ENST00000423228 335 ntBASIC16.09■□□□□ 0.17
SLC1A2P43004 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC1A2P43004 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.09■□□□□ 0.17
SLC1A2P43004 FAM86C2P-203ENST00000528684 1004 ntBASIC16.09■□□□□ 0.17
SLC1A2P43004 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC1A2P43004 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC1A2P43004 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC1A2P43004 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC1A2P43004 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC1A2P43004 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC1A2P43004 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC1A2P43004 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
SLC1A2P43004 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC1A2P43004 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC1A2P43004 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
SLC1A2P43004 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SLC1A2P43004 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC1A2P43004 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC1A2P43004 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC1A2P43004 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC1A2P43004 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms