Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.12■□□□□ 0.33
CTNNA1P35221 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTNNA1P35221 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTNNA1P35221 VN2R19P-201ENST00000442399 1052 ntBASIC17.12■□□□□ 0.33
CTNNA1P35221 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CTNNA1P35221 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.12■□□□□ 0.33
CTNNA1P35221 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CTNNA1P35221 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.12■□□□□ 0.33
CTNNA1P35221 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.12■□□□□ 0.33
CTNNA1P35221 AL773604.1-201ENST00000617417 272 ntBASIC17.12■□□□□ 0.33
CTNNA1P35221 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTNNA1P35221 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CTNNA1P35221 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CTNNA1P35221 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTNNA1P35221 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CTNNA1P35221 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTNNA1P35221 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CTNNA1P35221 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.12■□□□□ 0.33
CTNNA1P35221 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTNNA1P35221 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.12■□□□□ 0.33
CTNNA1P35221 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTNNA1P35221 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.12■□□□□ 0.33
CTNNA1P35221 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
CTNNA1P35221 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTNNA1P35221 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CTNNA1P35221 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.11■□□□□ 0.33
CTNNA1P35221 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CTNNA1P35221 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.11■□□□□ 0.33
CTNNA1P35221 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTNNA1P35221 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTNNA1P35221 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTNNA1P35221 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CTNNA1P35221 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTNNA1P35221 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTNNA1P35221 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTNNA1P35221 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTNNA1P35221 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTNNA1P35221 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
CTNNA1P35221 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTNNA1P35221 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTNNA1P35221 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CTNNA1P35221 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.11■□□□□ 0.33
CTNNA1P35221 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTNNA1P35221 AC098831.1-202ENST00000438821 336 ntBASIC17.11■□□□□ 0.33
CTNNA1P35221 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.11■□□□□ 0.33
CTNNA1P35221 AC109635.5-201ENST00000533593 962 ntBASIC17.11■□□□□ 0.33
CTNNA1P35221 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CTNNA1P35221 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.11■□□□□ 0.33
CTNNA1P35221 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.11■□□□□ 0.33
CTNNA1P35221 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.11■□□□□ 0.33
CTNNA1P35221 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CTNNA1P35221 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.11■□□□□ 0.33
CTNNA1P35221 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTNNA1P35221 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTNNA1P35221 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTNNA1P35221 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTNNA1P35221 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTNNA1P35221 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.11■□□□□ 0.33
CTNNA1P35221 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTNNA1P35221 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTNNA1P35221 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTNNA1P35221 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.11■□□□□ 0.33
CTNNA1P35221 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CTNNA1P35221 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTNNA1P35221 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTNNA1P35221 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTNNA1P35221 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CTNNA1P35221 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.1■□□□□ 0.33
CTNNA1P35221 PPT1-215ENST00000641471 2368 ntBASIC17.1■□□□□ 0.33
CTNNA1P35221 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.1■□□□□ 0.33
CTNNA1P35221 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CTNNA1P35221 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CTNNA1P35221 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTNNA1P35221 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTNNA1P35221 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTNNA1P35221 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.1■□□□□ 0.33
CTNNA1P35221 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.1■□□□□ 0.33
CTNNA1P35221 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.1■□□□□ 0.33
CTNNA1P35221 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CTNNA1P35221 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CTNNA1P35221 AC009947.1-201ENST00000444350 727 ntBASIC17.1■□□□□ 0.33
CTNNA1P35221 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.1■□□□□ 0.33
CTNNA1P35221 AP002469.2-201ENST00000531724 424 ntBASIC17.1■□□□□ 0.33
CTNNA1P35221 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CTNNA1P35221 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.1■□□□□ 0.33
CTNNA1P35221 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.1■□□□□ 0.33
CTNNA1P35221 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.1■□□□□ 0.33
CTNNA1P35221 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CTNNA1P35221 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CTNNA1P35221 AL031008.1-201ENST00000619963 541 ntBASIC17.1■□□□□ 0.33
CTNNA1P35221 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CTNNA1P35221 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CTNNA1P35221 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.1■□□□□ 0.33
CTNNA1P35221 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTNNA1P35221 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTNNA1P35221 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTNNA1P35221 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTNNA1P35221 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTNNA1P35221 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CTNNA1P35221 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms