Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.17■□□□□ 0.02
CHMP24386 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP24386 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP24386 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.17■□□□□ 0.02
CHMP24386 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.17■□□□□ 0.02
CHMP24386 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.17■□□□□ 0.02
CHMP24386 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP24386 AC112504.1-201ENST00000623415 1841 ntBASIC15.17■□□□□ 0.02
CHMP24386 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP24386 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP24386 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.17■□□□□ 0.02
CHMP24386 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.17■□□□□ 0.02
CHMP24386 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP24386 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.17■□□□□ 0.02
CHMP24386 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP24386 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP24386 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.17■□□□□ 0.02
CHMP24386 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP24386 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.17■□□□□ 0.02
CHMP24386 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.16■□□□□ 0.02
CHMP24386 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP24386 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP24386 AC073347.1-201ENST00000421633 2643 ntBASIC15.16■□□□□ 0.02
CHMP24386 PCGF3-213ENST00000620529 1899 ntBASIC15.16■□□□□ 0.02
CHMP24386 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CHMP24386 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP24386 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CHMP24386 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
CHMP24386 LINC02447-202ENST00000501888 2146 ntBASIC15.16■□□□□ 0.02
CHMP24386 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.16■□□□□ 0.02
CHMP24386 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP24386 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP24386 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP24386 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP24386 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP24386 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.16■□□□□ 0.02
CHMP24386 POU5F1P6-201ENST00000466990 990 ntBASIC15.16■□□□□ 0.02
CHMP24386 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.16■□□□□ 0.02
CHMP24386 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CHMP24386 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.16■□□□□ 0.02
CHMP24386 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.16■□□□□ 0.02
CHMP24386 MIR3909-201ENST00000579518 119 ntBASIC15.16■□□□□ 0.02
CHMP24386 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.16■□□□□ 0.02
CHMP24386 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP24386 AL078644.1-201ENST00000609881 752 ntBASIC15.16■□□□□ 0.02
CHMP24386 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP24386 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.16■□□□□ 0.02
CHMP24386 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.16■□□□□ 0.02
CHMP24386 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP24386 AC134684.3-201ENST00000641758 218 ntBASIC15.16■□□□□ 0.02
CHMP24386 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP24386 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP24386 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CHMP24386 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP24386 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
CHMP24386 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CHMP24386 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CHMP24386 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CHMP24386 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP24386 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.16■□□□□ 0.02
CHMP24386 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.16■□□□□ 0.02
CHMP24386 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CHMP24386 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP24386 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP24386 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CHMP24386 AC063926.3-201ENST00000624734 5658 ntBASIC15.15■□□□□ 0.02
CHMP24386 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.15■□□□□ 0.02
CHMP24386 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
CHMP24386 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP24386 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP24386 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP24386 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.15■□□□□ 0.02
CHMP24386 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.15■□□□□ 0.02
CHMP24386 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.15■□□□□ 0.02
CHMP24386 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP24386 AC007326.2-201ENST00000624224 7579 ntBASIC15.15■□□□□ 0.02
CHMP24386 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP24386 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP24386 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CHMP24386 PMS2P4-201ENST00000412466 1052 ntBASIC15.15■□□□□ 0.02
CHMP24386 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.15■□□□□ 0.02
CHMP24386 AC254562.1-201ENST00000417586 456 ntBASIC15.15■□□□□ 0.02
CHMP24386 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.15■□□□□ 0.02
CHMP24386 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.15■□□□□ 0.02
CHMP24386 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP24386 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP24386 MIR4469-201ENST00000583919 79 ntBASIC15.15■□□□□ 0.02
CHMP24386 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.15■□□□□ 0.02
CHMP24386 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.15■□□□□ 0.02
CHMP24386 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP24386 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP24386 GPAA1P2-202ENST00000606848 1787 ntBASIC15.15■□□□□ 0.02
CHMP24386 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP24386 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CHMP24386 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.15■□□□□ 0.02
CHMP24386 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP24386 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP24386 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.15■□□□□ 0.02
CHMP24386 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CHMP24386 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms