Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 AC098831.1-202ENST00000438821 336 ntBASIC15.14■□□□□ 0.01
OPN1SWP03999 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.14■□□□□ 0.01
OPN1SWP03999 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
OPN1SWP03999 MIR3909-201ENST00000579518 119 ntBASIC15.14■□□□□ 0.01
OPN1SWP03999 AL691432.3-201ENST00000621860 400 ntBASIC15.14■□□□□ 0.01
OPN1SWP03999 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.14■□□□□ 0.01
OPN1SWP03999 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
OPN1SWP03999 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
OPN1SWP03999 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
OPN1SWP03999 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
OPN1SWP03999 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.14■□□□□ 0.01
OPN1SWP03999 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
OPN1SWP03999 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
OPN1SWP03999 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
OPN1SWP03999 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
OPN1SWP03999 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.14■□□□□ 0.01
OPN1SWP03999 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
OPN1SWP03999 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.14■□□□□ 0.01
OPN1SWP03999 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.14■□□□□ 0.01
OPN1SWP03999 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
OPN1SWP03999 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
OPN1SWP03999 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
OPN1SWP03999 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
OPN1SWP03999 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
OPN1SWP03999 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.14■□□□□ 0.01
OPN1SWP03999 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
OPN1SWP03999 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
OPN1SWP03999 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
OPN1SWP03999 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.13■□□□□ 0.01
OPN1SWP03999 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.13■□□□□ 0.01
OPN1SWP03999 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
OPN1SWP03999 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
OPN1SWP03999 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
OPN1SWP03999 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
OPN1SWP03999 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
OPN1SWP03999 SSR4P1-203ENST00000599569 2260 ntBASIC15.13■□□□□ 0.01
OPN1SWP03999 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
OPN1SWP03999 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
OPN1SWP03999 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
OPN1SWP03999 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
OPN1SWP03999 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
OPN1SWP03999 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
OPN1SWP03999 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.13■□□□□ 0.01
OPN1SWP03999 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.13■□□□□ 0.01
OPN1SWP03999 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.13■□□□□ 0.01
OPN1SWP03999 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
OPN1SWP03999 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.13■□□□□ 0.01
OPN1SWP03999 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.13■□□□□ 0.01
OPN1SWP03999 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
OPN1SWP03999 PRSS29P-201ENST00000440800 595 ntBASIC15.13■□□□□ 0.01
OPN1SWP03999 AC093724.1-201ENST00000448659 1027 ntBASIC15.13■□□□□ 0.01
OPN1SWP03999 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.13■□□□□ 0.01
OPN1SWP03999 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.13■□□□□ 0.01
OPN1SWP03999 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
OPN1SWP03999 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
OPN1SWP03999 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
OPN1SWP03999 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
OPN1SWP03999 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.13■□□□□ 0.01
OPN1SWP03999 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.13■□□□□ 0.01
OPN1SWP03999 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
OPN1SWP03999 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
OPN1SWP03999 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
OPN1SWP03999 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.13■□□□□ 0.01
OPN1SWP03999 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
OPN1SWP03999 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.13■□□□□ 0.01
OPN1SWP03999 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
OPN1SWP03999 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
OPN1SWP03999 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
OPN1SWP03999 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.13■□□□□ 0.01
OPN1SWP03999 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
OPN1SWP03999 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
OPN1SWP03999 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.12■□□□□ 0.01
OPN1SWP03999 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
OPN1SWP03999 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.12■□□□□ 0.01
OPN1SWP03999 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.12■□□□□ 0.01
OPN1SWP03999 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
OPN1SWP03999 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
OPN1SWP03999 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.12■□□□□ 0.01
OPN1SWP03999 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
OPN1SWP03999 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
OPN1SWP03999 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
OPN1SWP03999 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.12■□□□□ 0.01
OPN1SWP03999 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
OPN1SWP03999 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.12■□□□□ 0.01
OPN1SWP03999 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
OPN1SWP03999 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.12■□□□□ 0.01
OPN1SWP03999 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
OPN1SWP03999 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
OPN1SWP03999 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
OPN1SWP03999 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
OPN1SWP03999 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
OPN1SWP03999 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.12■□□□□ 0.01
OPN1SWP03999 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.12■□□□□ 0.01
OPN1SWP03999 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
OPN1SWP03999 HAUS4P1-201ENST00000406739 1145 ntBASIC15.12■□□□□ 0.01
OPN1SWP03999 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
OPN1SWP03999 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.12■□□□□ 0.01
OPN1SWP03999 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.12■□□□□ 0.01
OPN1SWP03999 AP002469.2-201ENST00000531724 424 ntBASIC15.12■□□□□ 0.01
OPN1SWP03999 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms