Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRBC1P01850 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBC1P01850 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBC1P01850 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRBC1P01850 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBC1P01850 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBC1P01850 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.17■□□□□ 0.18
TRBC1P01850 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.17■□□□□ 0.18
TRBC1P01850 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.17■□□□□ 0.18
TRBC1P01850 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBC1P01850 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.17■□□□□ 0.18
TRBC1P01850 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBC1P01850 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.17■□□□□ 0.18
TRBC1P01850 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.17■□□□□ 0.18
TRBC1P01850 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.17■□□□□ 0.18
TRBC1P01850 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBC1P01850 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBC1P01850 CYMP-203ENST00000474680 1263 ntBASIC16.17■□□□□ 0.18
TRBC1P01850 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.17■□□□□ 0.18
TRBC1P01850 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
TRBC1P01850 AC069120.2-201ENST00000524091 540 ntBASIC16.17■□□□□ 0.18
TRBC1P01850 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBC1P01850 DUX4L27-201ENST00000554796 1261 ntBASIC16.17■□□□□ 0.18
TRBC1P01850 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.17■□□□□ 0.18
TRBC1P01850 AC027796.2-201ENST00000575326 344 ntBASIC16.17■□□□□ 0.18
TRBC1P01850 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
TRBC1P01850 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBC1P01850 AC093512.1-201ENST00000617969 520 ntBASIC16.17■□□□□ 0.18
TRBC1P01850 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.17■□□□□ 0.18
TRBC1P01850 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.17■□□□□ 0.18
TRBC1P01850 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBC1P01850 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBC1P01850 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBC1P01850 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TRBC1P01850 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBC1P01850 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
TRBC1P01850 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
TRBC1P01850 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRBC1P01850 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TRBC1P01850 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRBC1P01850 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TRBC1P01850 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBC1P01850 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
TRBC1P01850 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBC1P01850 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.16■□□□□ 0.18
TRBC1P01850 DOC2GP-204ENST00000639052 2548 ntBASIC16.16■□□□□ 0.18
TRBC1P01850 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBC1P01850 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.16■□□□□ 0.18
TRBC1P01850 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBC1P01850 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBC1P01850 AL513523.2-202ENST00000427283 2040 ntBASIC16.16■□□□□ 0.18
TRBC1P01850 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBC1P01850 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBC1P01850 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBC1P01850 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.16■□□□□ 0.18
TRBC1P01850 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBC1P01850 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBC1P01850 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBC1P01850 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBC1P01850 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBC1P01850 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBC1P01850 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBC1P01850 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBC1P01850 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBC1P01850 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.16■□□□□ 0.18
TRBC1P01850 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBC1P01850 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBC1P01850 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBC1P01850 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBC1P01850 AC004987.2-201ENST00000395959 1148 ntBASIC16.16■□□□□ 0.18
TRBC1P01850 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBC1P01850 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.16■□□□□ 0.18
TRBC1P01850 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBC1P01850 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.16■□□□□ 0.18
TRBC1P01850 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.16■□□□□ 0.18
TRBC1P01850 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.16■□□□□ 0.18
TRBC1P01850 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.16■□□□□ 0.18
TRBC1P01850 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBC1P01850 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.16■□□□□ 0.18
TRBC1P01850 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBC1P01850 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBC1P01850 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBC1P01850 AL391005.1-201ENST00000623953 2435 ntBASIC16.16■□□□□ 0.18
TRBC1P01850 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBC1P01850 AC018695.7-201ENST00000624587 2492 ntBASIC16.16■□□□□ 0.18
TRBC1P01850 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.15■□□□□ 0.18
TRBC1P01850 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
TRBC1P01850 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBC1P01850 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.15■□□□□ 0.18
TRBC1P01850 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBC1P01850 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
TRBC1P01850 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
TRBC1P01850 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBC1P01850 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBC1P01850 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBC1P01850 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRBC1P01850 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRBC1P01850 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.15■□□□□ 0.18
TRBC1P01850 MIR943-201ENST00000401286 94 ntBASIC16.15■□□□□ 0.18
TRBC1P01850 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms