Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
GGPS1O95749 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GGPS1O95749 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GGPS1O95749 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GGPS1O95749 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GGPS1O95749 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GGPS1O95749 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.07■□□□□ 0.48
GGPS1O95749 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GGPS1O95749 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
GGPS1O95749 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.07■□□□□ 0.48
GGPS1O95749 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.07■□□□□ 0.48
GGPS1O95749 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
GGPS1O95749 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GGPS1O95749 GK-202ENST00000378941 458 ntTSL 3 BASIC18.07■□□□□ 0.48
GGPS1O95749 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.07■□□□□ 0.48
GGPS1O95749 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.07■□□□□ 0.48
GGPS1O95749 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.07■□□□□ 0.48
GGPS1O95749 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.07■□□□□ 0.48
GGPS1O95749 AC008494.3-201ENST00000606615 944 ntBASIC18.07■□□□□ 0.48
GGPS1O95749 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GGPS1O95749 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
GGPS1O95749 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
GGPS1O95749 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
GGPS1O95749 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.07■□□□□ 0.48
GGPS1O95749 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.07■□□□□ 0.48
GGPS1O95749 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.07■□□□□ 0.48
GGPS1O95749 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GGPS1O95749 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.07■□□□□ 0.48
GGPS1O95749 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GGPS1O95749 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GGPS1O95749 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
GGPS1O95749 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
GGPS1O95749 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.07■□□□□ 0.48
GGPS1O95749 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GGPS1O95749 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GGPS1O95749 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GGPS1O95749 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GGPS1O95749 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
GGPS1O95749 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GGPS1O95749 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GGPS1O95749 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GGPS1O95749 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
GGPS1O95749 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
GGPS1O95749 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
GGPS1O95749 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.06■□□□□ 0.48
GGPS1O95749 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GGPS1O95749 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GGPS1O95749 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
GGPS1O95749 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.06■□□□□ 0.48
GGPS1O95749 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
GGPS1O95749 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.06■□□□□ 0.48
GGPS1O95749 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GGPS1O95749 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.06■□□□□ 0.48
GGPS1O95749 AC055876.2-201ENST00000531834 546 ntBASIC18.06■□□□□ 0.48
GGPS1O95749 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.06■□□□□ 0.48
GGPS1O95749 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GGPS1O95749 AC023310.3-201ENST00000557027 670 ntBASIC18.06■□□□□ 0.48
GGPS1O95749 AC100756.1-201ENST00000562736 682 ntBASIC18.06■□□□□ 0.48
GGPS1O95749 WASH4P-201ENST00000564273 1246 ntBASIC18.06■□□□□ 0.48
GGPS1O95749 AC138749.3-201ENST00000567691 622 ntBASIC18.06■□□□□ 0.48
GGPS1O95749 AC074044.1-201ENST00000609673 707 ntBASIC18.06■□□□□ 0.48
GGPS1O95749 AC116165.1-201ENST00000611806 668 ntBASIC18.06■□□□□ 0.48
GGPS1O95749 AC007431.3-201ENST00000623221 587 ntBASIC18.06■□□□□ 0.48
GGPS1O95749 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.06■□□□□ 0.48
GGPS1O95749 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GGPS1O95749 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GGPS1O95749 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.06■□□□□ 0.48
GGPS1O95749 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.06■□□□□ 0.48
GGPS1O95749 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.06■□□□□ 0.48
GGPS1O95749 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
GGPS1O95749 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.06■□□□□ 0.48
GGPS1O95749 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GGPS1O95749 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GGPS1O95749 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
GGPS1O95749 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.06■□□□□ 0.48
GGPS1O95749 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GGPS1O95749 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GGPS1O95749 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
GGPS1O95749 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
GGPS1O95749 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GGPS1O95749 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GGPS1O95749 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GGPS1O95749 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GGPS1O95749 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GGPS1O95749 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.05■□□□□ 0.48
GGPS1O95749 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GGPS1O95749 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
GGPS1O95749 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GGPS1O95749 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GGPS1O95749 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.05■□□□□ 0.48
GGPS1O95749 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GGPS1O95749 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
GGPS1O95749 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
GGPS1O95749 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.05■□□□□ 0.48
GGPS1O95749 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.05■□□□□ 0.48
GGPS1O95749 KRT17P7-201ENST00000451704 1104 ntBASIC18.05■□□□□ 0.48
GGPS1O95749 AC245100.5-201ENST00000452108 331 ntBASIC18.05■□□□□ 0.48
GGPS1O95749 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
GGPS1O95749 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.05■□□□□ 0.48
GGPS1O95749 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms